Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: production of miRNAs involved in gene silencing by miRNA

Term: GO:0035196  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene37383 SustainPine v1.1 1070
AutoFact: RNA-dependent RNA polymerase n=3 Tax=Arabidopsis RepID=Q9LKP0_ARATH 0.0
FL-Next: sp=RNA-dependent RNA polymerase 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna-dependent rna polymerase 6 0.0
C-terminus
sp_v1.1_unigene40736 SustainPine v1.1 528
AutoFact: RDR905; rna-dependent RNA polymerase 0.0
FL-Next: sp=Probable RNA-dependent RNA polymerase SHL2; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: rna-dependent rna polymerase 0.0
Internal
sp_v1.1_unigene41760 SustainPine v1.1 507
AutoFact: Ribonuclease III, putative n=1 Tax=Ricinus communis RepID=B9SC13_RICCO 5.0e-31
FL-Next: Isoform 2 of Endoribonuclease Dicer homolog 4 OS=Oryza sativa subsp. japonica GN=DCL4 0.0
Blast2go: dicer-like protein 9.45558e-31
N-terminus
sp_v1.1_unigene43346 SustainPine v1.1 887
AutoFact: AGO901; argonaute protein group 0.0
FL-Next: tr=Argonaute/Zwille-like protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: eukaryotic translation initiation factor 0.0
Internal
sp_v1.1_unigene48428 SustainPine v1.1 270
AutoFact: Endoribonuclease Dicer homolog 3a n=1 Tax=Oryza sativa Japonica Group RepID=DCL3A_ORYSJ 1.0e-28
FL-Next: sp=Endoribonuclease Dicer homolog 3a; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: ribonuclease iii family protein 6.5287e-29
Internal
sp_v1.1_unigene50964 SustainPine v1.1 351
AutoFact: Ribonuclease III, putative n=1 Tax=Ricinus communis RepID=B9RQZ1_RICCO 3.0e-34
FL-Next: sp=Endoribonuclease Dicer homolog 3a; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: ribonuclease iii family protein 5.19515e-34
Internal
sp_v1.1_unigene54954 SustainPine v1.1 415
AutoFact: Eukaryotic translation initiation factor 2c, putative n=1 Tax=Ricinus communis RepID=B9S921_RICCO 1.96182e-44
FL-Next: sp=Protein argonaute 7; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: eukaryotic translation initiation factor 1.12104e-44
Internal
sp_v1.1_unigene57437 SustainPine v1.1 424
AutoFact: Ribonuclease III, putative (EC:3.1.26.3); K11592 endoribonuclease Dicer [EC:3.1.26.-] 9.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dicer-like protein 1.51511e-33
Internal
sp_v1.1_unigene58431 SustainPine v1.1 717
AutoFact: RDR905; rna-dependent RNA polymerase 3.0e-23
FL-Next: sp=RNA-dependent RNA polymerase 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna-dependent rna polymerase 2.00305e-24
C-terminus
sp_v1.1_unigene62552 SustainPine v1.1 486
AutoFact: dicer-1, putative (EC:3.1.26.3); K11592 endoribonuclease Dicer [EC:3.1.26.-] 0.0
FL-Next: sp=Endoribonuclease Dicer homolog 1; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: dsrna-specific nuclease dicer and related ribonuclease 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain