Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: double-strand break repair

Term: GO:0006302  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene731 SustainPine v1.1 1730
AutoFact: DNA repair protein RAD51 homolog n=1 Tax=Solanum lycopersicum RepID=RAD51_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rad51 homolog 0.0
Complete
sp_v1.1_unigene2697 SustainPine v1.1 1438
AutoFact: Meiotic coiled-coil protein, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: meiotic nuclear division protein 1 homolog 0.0
Complete
sp_v1.1_unigene6349 SustainPine v1.1 744
AutoFact: DNA repair protein RAD50, putative n=1 Tax=Ricinus communis RepID=B9S9Y8_RICCO 0.0
FL-Next: sp=DNA repair protein RAD50; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna repair protein rad50 0.0
N-terminus
sp_v1.1_unigene14465 SustainPine v1.1 811
AutoFact: X-ray repair cross complementing protein 3, xrcc3, putative; K10880 DNA-repair protein XRCC3 1.0e-36
FL-Next: sp=DNA repair protein XRCC3 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rad51b protein 7.16474e-37
Internal
sp_v1.1_unigene27530 SustainPine v1.1 424
AutoFact: DNA repair protein RAD50, putative; K10866 DNA repair protein RAD50 [EC:3.6.-.-] 9.99967e-42
FL-Next: sp=DNA repair protein RAD50; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna repair protein rad50 5.18901e-42
Internal
sp_v1.1_unigene30618 SustainPine v1.1 668
AutoFact: DNA repair protein Rad50 n=8 Tax=Triticeae RepID=A8IE00_TRIMO 0.0
FL-Next: sp=DNA repair protein RAD50; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna repair protein rad50 0.0
Internal
sp_v1.1_unigene34895 SustainPine v1.1 546
AutoFact: DNA ligase (Fragment) n=2 Tax=Vitis vinifera RepID=D7SQI2_VITVI 3.0e-16
FL-Next: sp=Putative DNA ligase 4; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: dnli4_orysj ame: full= dna ligase 4 ame: full=dna ligase iv ame: full=polydeoxyribonucleotide synthase 4 4.86838e-16
Internal
sp_v1.1_unigene37510 SustainPine v1.1 551
AutoFact: ku P80 DNA helicase, putative; K10885 ATP-dependent DNA helicase 2 subunit 2 1.0e-32
FL-Next: sp=ATP-dependent DNA helicase 2 subunit KU80; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ku p80 dna 0.0
Putative C-terminus
sp_v1.1_unigene38680 SustainPine v1.1 467
AutoFact: RAD50; RAD50; ATP binding / nuclease/ zinc ion binding; K10866 DNA repair protein RAD50 [EC:3.6.-.-] 4.0e-27
FL-Next: sp=DNA repair protein RAD50; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna repair protein rad50 2.58731e-33
Internal
sp_v1.1_unigene40680 SustainPine v1.1 397
AutoFact: ku P80 DNA helicase, putative; K10885 ATP-dependent DNA helicase 2 subunit 2 8.0e-31
FL-Next: sp=ATP-dependent DNA helicase 2 subunit KU80; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: ku p80 dna 8.25608e-32
Internal
sp_v1.1_unigene41279 SustainPine v1.1 280
AutoFact: DNA repair protein Rad50 n=8 Tax=Triticeae RepID=A8IE00_TRIMO 3.0e-16
FL-Next: sp=DNA repair protein RAD50; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna repair protein rad50 2.54598e-17
Internal
sp_v1.1_unigene41403 SustainPine v1.1 506
AutoFact: RAD50; RAD50; ATP binding / nuclease/ zinc ion binding; K10866 DNA repair protein RAD50 [EC:3.6.-.-] 0.0
FL-Next: sp=DNA repair protein RAD50; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna repair protein rad50 0.0
C-terminus
sp_v1.1_unigene42449 SustainPine v1.1 636
AutoFact: DNA ligase n=1 Tax=Sorghum bicolor RepID=C5YFJ3_SORBI 0.0
FL-Next: sp=DNA ligase 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna ligase 0.0
Internal
sp_v1.1_unigene46181 SustainPine v1.1 462
AutoFact: DNA repair protein Rad50 n=8 Tax=Triticeae RepID=A8IE00_TRIMO 2.94273e-44
FL-Next: sp=DNA repair protein RAD50; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna repair protein rad50 0.0
Internal
sp_v1.1_unigene57968 SustainPine v1.1 356
AutoFact: ku P80 DNA helicase, putative; K10885 ATP-dependent DNA helicase 2 subunit 2 6.0e-37
FL-Next: sp=ATP-dependent DNA helicase 2 subunit KU80; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: ku p80 dna 3.82901e-37
Internal
sp_v1.1_unigene64950 SustainPine v1.1 672
AutoFact: rad51b; recombination protein51 gene b; K04482 DNA repair protein RAD51 0.0
FL-Next: sp=DNA repair protein RAD51 homolog B; Zea mays (Maize). 0.0
Blast2go: rad51 homolog 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain