Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: dna binding

Source: Description from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene38962 SustainPine v1.1 461
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RWI9_RICCO 1.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 3.65387e-32
Internal
sp_v1.1_unigene39339 SustainPine v1.1 422
AutoFact: DUF659 domain containing protein 5.00264e-43
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dna binding 1.16364e-33
Internal
sp_v1.1_unigene39385 SustainPine v1.1 412
AutoFact: MBD9; MBD9; DNA binding / methyl-CpG binding 4.99983e-42
FL-Next: sp=Methyl-CpG-binding domain-containing protein 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna binding 1.13813e-41
Internal
sp_v1.1_unigene39482 SustainPine v1.1 405
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dna binding 6.34114e-16
Internal
sp_v1.1_unigene41492 SustainPine v1.1 379
AutoFact: DNA binding protein, putative 2.0e-15
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: dna binding 9.49698e-20
Internal
sp_v1.1_unigene41517 SustainPine v1.1 610
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dna binding 1.32066e-16
N-terminus
sp_v1.1_unigene42318 SustainPine v1.1 659
AutoFact: Contains similarity to excision repair protein ERCC5 from Homo sapiens gi|1082359 and contains XPG N-terminal PF|00752 and XPG I-region PF|00867 domains [Arabidopsis thaliana] 1.0e-27
FL-Next: sp=Flap endonuclease GEN-like 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna binding 1.25564e-29
N-terminus
sp_v1.1_unigene43280 SustainPine v1.1 606
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SH81_RICCO 7.0e-20
FL-Next: sp=Methyl-CpG-binding domain-containing protein 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna binding 1.25822e-19
Internal
sp_v1.1_unigene43812 SustainPine v1.1 437
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: dna binding 5.50817e-12
Internal
sp_v1.1_unigene44671 SustainPine v1.1 214
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9S516_RICCO 4.0e-11
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: dna binding 3.44125e-14
Internal
sp_v1.1_unigene44713 SustainPine v1.1 342
AutoFact: Drf_FH1 multi-domain protein 2.0e-09
FL-Next: sp=Formin-like protein 3; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: dna binding 8.1456e-19
Internal
sp_v1.1_unigene45272 SustainPine v1.1 477
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RBQ7_RICCO 6.0e-13
FL-Next: tr=DNA binding protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: dna binding 1.71459e-13
Internal
sp_v1.1_unigene45628 SustainPine v1.1 572
AutoFact: DNA binding protein n=1 Tax=Zea mays RepID=B6SJB5_MAIZE 6.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 4.61125e-31
Putative N-terminus
sp_v1.1_unigene45812 SustainPine v1.1 526
AutoFact: DNA binding; K11723 bromodomain-containing protein 7/9 3.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 6.35618e-14
Internal
sp_v1.1_unigene46502 SustainPine v1.1 493
AutoFact: DNA binding protein, putative 2.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 3.47365e-22
Complete
sp_v1.1_unigene48455 SustainPine v1.1 412
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: dna binding 2.62686e-38
Internal
sp_v1.1_unigene48548 SustainPine v1.1 275
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9S516_RICCO 4.0e-29
FL-Next: tr=DNA binding protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: dna binding 8.49658e-29
Internal
sp_v1.1_unigene49534 SustainPine v1.1 354
AutoFact: ELM2; AT-rich interaction region; Homeodomain-related [Medicago truncatula] 1.0e-13
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: dna binding 3.72594e-16
Internal
sp_v1.1_unigene51035 SustainPine v1.1 378
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RA95_RICCO 4.0e-26
FL-Next: tr=DNA binding protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: dna binding 6.79023e-26
Internal
sp_v1.1_unigene51147 SustainPine v1.1 783
AutoFact: DUF659 domain containing protein 2.0e-32
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dna binding 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain