Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: dna binding

Source: Description from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene27524 SustainPine v1.1 734
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SEI3_RICCO 6.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 1.33597e-20
Internal
sp_v1.1_unigene27603 SustainPine v1.1 1230
AutoFact: PHD finger transcription factor, putative [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: dna binding 0.0
C-terminus
sp_v1.1_unigene30064 SustainPine v1.1 1455
AutoFact: DNA binding protein, putative 1.99965e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 0.0
Complete
sp_v1.1_unigene30132 SustainPine v1.1 1493
AutoFact: DUF659 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 0.0
Putative Complete
sp_v1.1_unigene30725 SustainPine v1.1 1214
AutoFact: PHD finger family protein [Arabidopsis thaliana] sp|Q9C810.1|Y1342_ARATH RecName: Full=PHD finger protein At1g33420 gb|AAG51204.1|AC051630_1 hypothetical protein; 47104-44821 [Arabidopsis thaliana] gb|AAK59559.1| unknown protein [Arabidopsis thaliana] gb| 5.0e-25
FL-Next: sp=PHD finger protein At1g33420; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna binding 1.65108e-29
Putative C-terminus
sp_v1.1_unigene30748 SustainPine v1.1 609
AutoFact: DNA binding protein, putative 5.0e-23
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Blast2go: dna binding 7.35771e-30
Internal
sp_v1.1_unigene30868 SustainPine v1.1 680
AutoFact: DNA binding protein, putative 1.0e-17
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: dna binding 5.60643e-20
Internal
sp_v1.1_unigene31339 SustainPine v1.1 924
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9R7B1_RICCO 3.0e-11
FL-Next: tr=DNA binding protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: dna binding 5.05463e-11
Internal
sp_v1.1_unigene32814 SustainPine v1.1 1383
AutoFact: DNA binding protein, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 0.0
Complete
sp_v1.1_unigene33103 SustainPine v1.1 347
AutoFact: DNA binding 4.0e-20
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: dna binding 4.28496e-20
Putative N-terminus
sp_v1.1_unigene33127 SustainPine v1.1 420
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 3.74948e-16
Internal
sp_v1.1_unigene33923 SustainPine v1.1 675
AutoFact: Putative ripening-related bZIP protein n=1 Tax=Vitis vinifera RepID=Q9M4H1_VITVI 3.0e-21
FL-Next: sp=ABSCISIC ACID-INSENSITIVE 5-like protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna binding 5.01569e-21
Internal
sp_v1.1_unigene35373 SustainPine v1.1 1020
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RB66_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 0.0
Putative Complete
sp_v1.1_unigene35503 SustainPine v1.1 755
AutoFact: Helix-loop-helix protein 1A n=1 Tax=Pinus taeda RepID=Q9SQ79_PINTA 0.0
FL-Next: tr=Helix-loop-helix protein 1A; Pinus taeda (Loblolly pine). 0.0
Blast2go: dna binding 0.0
Putative C-terminus
sp_v1.1_unigene35594 SustainPine v1.1 920
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dna binding 9.70355e-23
Internal
sp_v1.1_unigene36110 SustainPine v1.1 687
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SH81_RICCO 4.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 1.85926e-34
C-terminus
sp_v1.1_unigene36379 SustainPine v1.1 370
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 1.4345e-15
Putative N-terminus
sp_v1.1_unigene36690 SustainPine v1.1 1077
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RY52_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 0.0
Putative C-terminus
sp_v1.1_unigene37346 SustainPine v1.1 812
AutoFact: DNA binding protein, putative 8.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 1.2304e-36
Putative N-terminus
sp_v1.1_unigene38907 SustainPine v1.1 465
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RUU8_RICCO 2.0e-17
FL-Next: sp=Methyl-CpG-binding domain-containing protein 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna binding 3.39484e-17
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain