Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: RNA processing

Term: GO:0006396  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene17771 SustainPine v1.1 363
AutoFact: Polynucleotide phosphorylase n=1 Tax=Pisum sativum RepID=O24288_PEA 0.0
FL-Next: tr=Polynucleotide phosphorylase; Pisum sativum (Garden pea). 0.0
Blast2go: polynucleotide phosphorylase 0.0
Internal
sp_v1.1_unigene18547 SustainPine v1.1 607
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 3.74968e-24
N-terminus
sp_v1.1_unigene19097 SustainPine v1.1 798
AutoFact: Similarity to ribonuclease III n=1 Tax=Cryptomeria japonica RepID=Q1XG54_CRYJA 4.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: similarity to ribonuclease iii 1.05792e-27
N-terminus
sp_v1.1_unigene19119 SustainPine v1.1 1957
AutoFact: 60S ribosomal protein-related 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene19923 SustainPine v1.1 362
AutoFact: Dicer-like 4 n=1 Tax=Physcomitrella patens RepID=B3SRQ1_9BRYO 5.0e-12
FL-Next: sp=Dicer-like protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dsrna-specific nuclease dicer and related ribonuclease 9.35761e-12
Internal
sp_v1.1_unigene26915 SustainPine v1.1 249
AutoFact: ARA1; ARA1 (ARABINOSE KINASE); ATP binding / L-arabinokinase/ galactokinase; K12446 L-arabinokinase [EC:2.7.1.46] 2.0e-26
FL-Next: sp=L-arabinokinase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: galactokinase like protein 1.34236e-26
Internal
sp_v1.1_unigene27165 SustainPine v1.1 1802
AutoFact: symplekin, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: protein 0.0
Putative C-terminus
sp_v1.1_unigene27184 SustainPine v1.1 1696
AutoFact: Putative proline-rich protein n=3 Tax=Arabidopsis RepID=Q8VYM7_ARATH 1.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: proline-rich protein precursor 0.0
N-terminus
sp_v1.1_unigene28349 SustainPine v1.1 1645
AutoFact: splicing factor yt521-B, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus
sp_v1.1_unigene28964 SustainPine v1.1 1972
AutoFact: splicing factor yt521-B, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene42675 SustainPine v1.1 443
AutoFact: ESP4 (ENHANCED SILENCING PHENOTYPE 4); binding [Arabidopsis thaliana] emb|CAB81923.1| putative protein [Arabidopsis thaliana] 3.0e-15
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 9.57068e-28
Internal
sp_v1.1_unigene43969 SustainPine v1.1 224
AutoFact: Unassigned protein
FL-Next: sp=PsbB mRNA maturation factor Mbb1, chloroplastic; Chlamydomonas reinhardtii (Chlamydomonas smithii). 0.0
Blast2go: pre-mrna splicing 3.29835e-28
Internal
sp_v1.1_unigene48984 SustainPine v1.1 278
AutoFact: CPSF30; CPSF30; RNA binding / calmodulin binding / endonuclease/ nucleic acid binding / protein binding 1.0e-19
FL-Next: Isoform 2 of Cleavage and polyadenylation specificity factor CPSF30 OS=Arabidopsis thaliana GN=CPSF30 0.0
Blast2go: c-x8-c-x5-c-x3-h type zn-finger 4.49971e-22
Internal
sp_v1.1_unigene62032 SustainPine v1.1 688
AutoFact: ESP4 (ENHANCED SILENCING PHENOTYPE 4); binding [Arabidopsis thaliana] emb|CAB81923.1| putative protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain