Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: DNA endoreduplication

Term: GO:0042023  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene311 SustainPine v1.1 1196
AutoFact: Type II DNA topoisomerase VI subunit B, putative (EC:5.99.1.3) 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: topoisomerase 6 subunit b 0.0
N-terminus
sp_v1.1_unigene1391 SustainPine v1.1 2228
AutoFact: DPa; transcription factor DP, E2 dimerization partner protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor e2 dimerization partner protein 0.0
Putative Complete
sp_v1.1_unigene1542 SustainPine v1.1 2496
AutoFact: Hect ubiquitin-protein ligase, putative n=1 Tax=Ricinus communis RepID=B9SXV1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-protein upl3 0.0
Complete
sp_v1.1_unigene4115 SustainPine v1.1 1799
AutoFact: gc-rich sequence DNA-binding factor, putative; K13211 GC-rich sequence DNA-binding factor 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: gc-rich sequence dna-binding 0.0
C-terminus
sp_v1.1_unigene5551 SustainPine v1.1 1052
AutoFact: ATTOP6B (topoisomerase 6 subunit B); DNA topoisomerase (ATP-hydrolyzing)/ identical protein binding / protein binding 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: type ii dna topoisomerase vi subunit b 0.0
C-terminus
sp_v1.1_unigene6083 SustainPine v1.1 1871
AutoFact: PREDICTED: similar to KAK (KAKTUS) isoform 1 n=2 Tax=Vitis vinifera RepID=UPI0001982DD6 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-protein upl3 0.0
C-terminus
sp_v1.1_unigene10013 SustainPine v1.1 1129
AutoFact: PYM protein 4.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pym protein 0.0
Complete
sp_v1.1_unigene11113 SustainPine v1.1 499
AutoFact: RHL1; RHL1 (ROOT HAIRLESS 1); DNA binding / protein binding 1.0e-11
FL-Next: sp=DNA-binding protein RHL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: root hairless 1 9.93941e-14
N-terminus
sp_v1.1_unigene12302 SustainPine v1.1 854
AutoFact: PREDICTED: similar to KAK (KAKTUS) isoform 1 n=2 Tax=Vitis vinifera RepID=UPI0001982DD6 0.0
FL-Next: sp=E3 ubiquitin-protein ligase UPL3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ubiquitin-protein upl3 0.0
Internal
sp_v1.1_unigene14101 SustainPine v1.1 1306
AutoFact: DPa; transcription factor DP, E2 dimerization partner protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor e2 dimerization partner protein 0.0
C-terminus
sp_v1.1_unigene14829 SustainPine v1.1 1877
AutoFact: s-adenosyl-l-methionine:delta24-sterol-C- methyltransferase, putative (EC:2.1.1.143); K08242 24-methylenesterol C-methyltransferase [EC:2.1.1.143] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene15748 SustainPine v1.1 939
AutoFact: Cyclin-dependent kinases regulatory subunit 1 n=4 Tax=BEP clade RepID=CKS1_ORYSJ 5.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cyclin-dependent kinases regulatory subunit 2.63773e-39
Complete
sp_v1.1_unigene17527 SustainPine v1.1 2173
AutoFact: DPb; transcription factor DP, E2 dimerization partner protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor e2 dimerization partner protein 0.0
Complete
sp_v1.1_unigene17914 SustainPine v1.1 697
AutoFact: Cyclin-dependent kinases regulatory subunit, putative; K02219 cyclin-dependent kinase regulatory subunit CKS1 5.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cyclin-dependent kinases regulatory subunit 2.40424e-37
Complete
sp_v1.1_unigene17918 SustainPine v1.1 430
AutoFact: PREDICTED: similar to KAK (KAKTUS) isoform 1 n=2 Tax=Vitis vinifera RepID=UPI0001982DD6 1.0e-19
FL-Next: sp=E3 ubiquitin-protein ligase UPL3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ubiquitin-protein upl3 2.7282e-19
Internal
sp_v1.1_unigene19217 SustainPine v1.1 1614
AutoFact: CDC27 multi-domain protein 7.0e-07
FL-Next: sp=DNA-binding protein BIN4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: bin4 (brassinosteroid-insensitive4) double-stranded dna binding 7.70714e-44
C-terminus
sp_v1.1_unigene21268 SustainPine v1.1 940
AutoFact: Cyclin-dependent kinases regulatory subunit, putative; K02219 cyclin-dependent kinase regulatory subunit CKS1 1.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cyclin-dependent kinases regulatory subunit 0.0
Complete
sp_v1.1_unigene26715 SustainPine v1.1 806
AutoFact: Cyclin-dependent kinases regulatory subunit, putative; K02219 cyclin-dependent kinase regulatory subunit CKS1 3.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cyclin-dependent kinases regulatory subunit 4.66294e-36
Complete
sp_v1.1_unigene29449 SustainPine v1.1 1080
AutoFact: Cyclin-dependent kinases regulatory subunit, putative; K02219 cyclin-dependent kinase regulatory subunit CKS1 1.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cyclin-dependent kinases regulatory subunit 0.0
Complete
sp_v1.1_unigene34276 SustainPine v1.1 304
AutoFact: RHL1; RHL1 (ROOT HAIRLESS 1); DNA binding / protein binding 2.0e-30
FL-Next: sp=DNA-binding protein RHL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: root hairless 1 1.59261e-35
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain