Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: intracellular part

Term: GO:0044424  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene75868 SustainPine v1.1 533
AutoFact: Ribosomal protein L19 n=4 Tax=Embryophyta RepID=A9NU99_PICSI 2.0e-27
FL-Next: sp=Ribosomal protein L19; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l19-3 4.35803e-27
N-terminus
sp_v1.1_unigene76058 SustainPine v1.1 581
AutoFact: small nuclear ribonucleoprotein f, putative; K12625 U6 snRNA-associated Sm-like protein LSm6 6.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 5.38876e-30
Putative Complete
sp_v1.1_unigene76312 SustainPine v1.1 601
AutoFact: coatomer alpha subunit, putative (EC:2.7.11.7); K05236 coatomer protein complex, subunit alpha (xenin) 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: coatomer alpha 0.0
C-terminus
sp_v1.1_unigene76341 SustainPine v1.1 381
AutoFact: 26S proteasome non-ATPase regulatory subunit, putative; K03030 26S proteasome regulatory subunit N11 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 26s proteasome non-atpase regulatory subunit 14 0.0
Putative C-terminus
sp_v1.1_unigene76363 SustainPine v1.1 439
AutoFact: pco082032; LOC100274928; K03038 26S proteasome regulatory subunit N8 2.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 2.44348e-34
Putative C-terminus
sp_v1.1_unigene77442 SustainPine v1.1 911
AutoFact: Proteasome subunit beta type-3 n=2 Tax=Picea RepID=PSB3_PICMA 0.0
FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
sp_v1.1_unigene78580 SustainPine v1.1 425
AutoFact: Proteasome subunit beta type n=2 Tax=Picea sitchensis RepID=A9NLJ2_PICSI 0.0
FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: multicatalytic endopeptidase proteasome beta subunit 0.0
Putative C-terminus
sp_v1.1_unigene78790 SustainPine v1.1 540
AutoFact: Proteasome subunit beta type n=1 Tax=Picea sitchensis RepID=A9NYV8_PICSI 0.0
FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 20s proteasome beta subunit pbb2 0.0
N-terminus
sp_v1.1_unigene78985 SustainPine v1.1 468
AutoFact: Proteasome subunit beta type-3 n=2 Tax=Picea RepID=PSB3_PICMA 4.00001e-40
FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: proteasome subunit beta 8.32409e-40
N-terminus
sp_v1.1_unigene79205 SustainPine v1.1 402
AutoFact: Proteasome subunit beta type n=2 Tax=Picea sitchensis RepID=A9NLJ2_PICSI 7.0e-38
FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: multicatalytic endopeptidase proteasome beta subunit 1.20063e-38
Internal
sp_v1.1_unigene79240 SustainPine v1.1 307
AutoFact: RPN9 (Fragment) n=1 Tax=Nicotiana benthamiana RepID=Q076B1_NICBE 8.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 26s proteasome non-atpase regulatory subunit 13 1.83744e-23
C-terminus
sp_v1.1_unigene79621 SustainPine v1.1 484
AutoFact: Chlorophyll a-b binding protein 2 n=1 Tax=Zea mays RepID=B6SZ08_MAIZE 0.0
FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Blast2go: chlorophyll a-b binding protein 2 0.0
Putative C-terminus
sp_v1.1_unigene79685 SustainPine v1.1 435
AutoFact: Proteasome subunit beta type n=1 Tax=Picea sitchensis RepID=A9NMG7_PICSI 4.0e-20
FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: proteasome component c5 7.2183e-20
Putative Complete
sp_v1.1_unigene80284 SustainPine v1.1 788
AutoFact: large subunit ribosomal protein LP2; K02943 large subunit ribosomal protein LP2 8.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s acidic ribosomal protein 5.15162e-24
Complete
sp_v1.1_unigene80702 SustainPine v1.1 549
AutoFact: 60S ribosomal protein L15-1 n=22 Tax=Embryophyta RepID=RL15A_PICMA 4.0e-34
FL-Next: sp=Ribosomal protein L15; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 2.54601e-34
N-terminus
sp_v1.1_unigene81463 SustainPine v1.1 376
AutoFact: Unassigned protein
FL-Next: sp=Topless-related protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 1.89405e-19
Internal
sp_v1.1_unigene81830 SustainPine v1.1 635
AutoFact: Proteasome subunit beta type n=2 Tax=Picea sitchensis RepID=A9NKT0_PICSI 0.0
FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 20s proteasome beta subunit pbg1 0.0
Putative N-terminus
sp_v1.1_unigene82142 SustainPine v1.1 667
AutoFact: Calcium binding protein n=1 Tax=Pinus taeda RepID=O22429_PINTA 0.0
FL-Next: tr=Calcium binding protein; Pinus taeda (Loblolly pine). 0.0
Blast2go: polcalcin jun o 2 0.0
Putative Complete
sp_v1.1_unigene86420 SustainPine v1.1 504
AutoFact: 26S proteasome non-ATPase regulatory subunit 14; K03030 26S proteasome regulatory subunit N11 9.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 26s proteasome non-atpase regulatory subunit 14 1.2602e-27
C-terminus
sp_v1.1_unigene90462 SustainPine v1.1 864
AutoFact: Predicted protein n=2 Tax=Physcomitrella patens subsp. patens RepID=A9RSP3_PHYPA 4.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: small nuclear ribonucleoprotein e 3.19132e-41
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain