Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: DNA repair

Term: GO:0006281  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene178 SustainPine v1.1 2285
AutoFact: NEDD8-activating enzyme E1 regulatory subunit, putative; K04532 amyloid beta precursor protein binding protein 1 0.0
FL-Next: sp=NEDD8-activating enzyme E1 regulatory subunit; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene508 SustainPine v1.1 1827
AutoFact: DNA-damage repair protein drt111, putative; K12840 splicing factor 45 0.0
FL-Next: sp=DNA-damage-repair/toleration protein DRT111, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene903 SustainPine v1.1 2397
AutoFact: ETG1; ETG1 (E2F TARGET GENE 1) 0.0
FL-Next: sp=Mini-chromosome maintenance complex-binding protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: etg1 (e2f target gene 1) 0.0
Complete
sp_v1.1_unigene1475 SustainPine v1.1 1249
AutoFact: Poly [ADP-ribose] polymerase 1 n=2 Tax=Arabidopsis RepID=PARP1_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: poly(adp-ribose) polymerase 0.0
C-terminus
sp_v1.1_unigene2193 SustainPine v1.1 827
AutoFact: 8-oxoguanine DNA glycosylase, putative n=1 Tax=Ricinus communis RepID=B9S2W7_RICCO 2.0e-24
FL-Next: tr=8-oxoguanine DNA glycosylase, putative; Ricinus communis (Castor bean). 0.0
Blast2go: 8-oxoguanine dna 3.23396e-24
Putative C-terminus
sp_v1.1_unigene2969 SustainPine v1.1 1139
AutoFact: DNA damage-binding protein, putative; K10140 DNA damage-binding protein 2 0.0
FL-Next: sp=Protein DAMAGED DNA-BINDING 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna damage-binding 0.0
N-terminus
sp_v1.1_unigene3340 SustainPine v1.1 951
AutoFact: DNA repair metallo-beta-lactamase n=1 Tax=Medicago truncatula RepID=Q2HRV5_MEDTR 1.0e-37
FL-Next: sp=DNA cross-link repair protein SNM1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: snm1 (sensitive to nitrogen mustard 1) 2.15954e-37
C-terminus
sp_v1.1_unigene3617 SustainPine v1.1 1117
AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9H8P5_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna repair and recombination protein 0.0
Complete
sp_v1.1_unigene4640 SustainPine v1.1 937
AutoFact: DNA damage-binding protein, putative; K10140 DNA damage-binding protein 2 0.0
FL-Next: sp=Protein DAMAGED DNA-BINDING 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: uv-damaged dna binding protein 2 0.0
C-terminus
sp_v1.1_unigene5237 SustainPine v1.1 664
AutoFact: DNA repair helicase rad3/xp-d, putative 0.0
FL-Next: sp=DNA repair helicase UVH6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Putative N-terminus
sp_v1.1_unigene5372 SustainPine v1.1 1348
AutoFact: ARP1504; actin-related protein Arp5; K11672 actin-related protein 5 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: actin-related protein arp5 0.0
Complete
sp_v1.1_unigene6350 SustainPine v1.1 498
AutoFact: DNA cross-link repair protein pso2/snm1, putative 0.0
FL-Next: sp=DNA cross-link repair protein SNM1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: snm1 (sensitive to nitrogen mustard 1) 0.0
Internal
sp_v1.1_unigene6650 SustainPine v1.1 1126
AutoFact: ARP1504; actin-related protein Arp5; K11672 actin-related protein 5 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: actin-related protein 5 0.0
Complete
sp_v1.1_unigene6963 SustainPine v1.1 984
AutoFact: DNA repair and recombination protein radB, putative n=1 Tax=Ricinus communis RepID=B9SYN5_RICCO 7.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna repair and recombination protein 0.0
C-terminus
sp_v1.1_unigene7423 SustainPine v1.1 464
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_3.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TKE6_VITVI 2.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: brca1 associated ring 4.41762e-25
Putative N-terminus
sp_v1.1_unigene10007 SustainPine v1.1 1374
AutoFact: Light-mediated development protein DET1, putative n=1 Tax=Ricinus communis RepID=B9S080_RICCO 0.0
FL-Next: sp=Light-mediated development protein DET1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: light-mediated development protein det1 0.0
C-terminus
sp_v1.1_unigene10493 SustainPine v1.1 1793
AutoFact: Iron-sulfur cluster assembly protein n=1 Tax=Chlamydomonas reinhardtii RepID=A8IR30_CHLRE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: at4g01940 t7b11_20 0.0
Complete
sp_v1.1_unigene10522 SustainPine v1.1 529
AutoFact: 70 kDa subunit of replication protein A n=1 Tax=Ipomoea nil RepID=A6BLP0_IPONI 0.0
FL-Next: tr=70 kDa subunit of replication protein A; Ipomoea nil (Japanese morning glory) (Pharbitis nil). 0.0
Blast2go: replication protein a1 0.0
Internal
sp_v1.1_unigene10638 SustainPine v1.1 1973
AutoFact: endonuclease, putative; K04799 flap endonuclease-1 [EC:3.-.-.-] 0.0
FL-Next: sp=Flap endonuclease 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: flap endonuclease-1b 0.0
Complete
sp_v1.1_unigene10833 SustainPine v1.1 597
AutoFact: CPD photolyase n=1 Tax=Cucumis sativus RepID=Q9AVI6_CUCSA 0.0
FL-Next: sp=Deoxyribodipyrimidine photo-lyase; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: cpd photolyase 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain