Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: DNA repair

Term: GO:0006281  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene28375 SustainPine v1.1 614
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9R702_RICCO 0.0
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
Blast2go: cockayne syndrome 1 homolog 0.0
C-terminus
sp_v1.1_unigene30341 SustainPine v1.1 463
AutoFact: poly [ADP-ribose] polymerase, putative (EC:1.3.1.74); K10798 poly [ADP-ribose] polymerase [EC:2.4.2.30] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: poly(adp-ribose) polymerase 0.0
N-terminus
sp_v1.1_unigene31416 SustainPine v1.1 601
AutoFact: Poly [ADP-ribose] polymerase 3 n=3 Tax=Oryza sativa RepID=PARP3_ORYSJ 1.0e-18
FL-Next: sp=Poly [ADP-ribose] polymerase 3; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: poly(adp-ribose) polymerase 2.29562e-18
Putative N-terminus
sp_v1.1_unigene33161 SustainPine v1.1 325
AutoFact: poly [ADP-ribose] polymerase, putative (EC:1.3.1.74); K10798 poly [ADP-ribose] polymerase [EC:2.4.2.30] 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: poly(adp-ribose) polymerase 5.02126e-21
N-terminus
sp_v1.1_unigene39289 SustainPine v1.1 468
AutoFact: Unassigned protein
FL-Next: sp=Protein ROS1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: transcriptional activator demeter 0.0
Internal
sp_v1.1_unigene39874 SustainPine v1.1 459
AutoFact: similar to deetiolated 1-like protein; K10571 de-etiolated-1 0.0
FL-Next: sp=Light-mediated development protein DET1; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
Blast2go: hp2 protein 0.0
Putative N-terminus
sp_v1.1_unigene40802 SustainPine v1.1 379
AutoFact: RAD51D (ARABIDOPSIS HOMOLOG OF RAD51 D); ATP binding / DNA binding / DNA-dependent ATPase [Arabidopsis thaliana] 2.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna repair and recombination protein 1.04257e-42
Internal
sp_v1.1_unigene42527 SustainPine v1.1 349
AutoFact: DNA repair and recombination protein RAD26, putative n=1 Tax=Ricinus communis RepID=B9SV29_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna repair and recombination protein 0.0
Internal
sp_v1.1_unigene42613 SustainPine v1.1 302
AutoFact: poly [ADP-ribose] polymerase, putative (EC:1.3.1.74); K10798 poly [ADP-ribose] polymerase [EC:2.4.2.30] 3.0e-37
FL-Next: sp=Poly [ADP-ribose] polymerase 1; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: poly(adp-ribose) polymerase 5.15117e-42
Internal
sp_v1.1_unigene44767 SustainPine v1.1 280
AutoFact: Unassigned protein
FL-Next: Isoform 2 of Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME 0.0
Blast2go: dna glycosylase 7.66575e-14
Internal
sp_v1.1_unigene45240 SustainPine v1.1 365
AutoFact: Unassigned protein
FL-Next: sp=DNA cross-link repair protein SNM1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: sterile alpha motif domain-containing protein 0.0
Internal
sp_v1.1_unigene47093 SustainPine v1.1 347
AutoFact: DNA polymerase (Fragment) n=1 Tax=Vitis vinifera RepID=D7U238_VITVI 9.0e-25
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dna polymerase zeta subunit 1.68805e-24
Internal
sp_v1.1_unigene48690 SustainPine v1.1 464
AutoFact: MUS81; MUS81 (MMS AND UV SENSITIVE 81); endonuclease/ nucleic acid binding; K08991 crossover junction endonuclease MUS81 [EC:3.1.22.-] 1.0e-15
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: mus81 (mms and uv sensitive 81) endonuclease nucleic acid binding 1.20128e-18
Internal
sp_v1.1_unigene55004 SustainPine v1.1 491
AutoFact: DNG902; DNA glycosylase 0.0
FL-Next: Isoform 2 of Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME 0.0
Blast2go: transcriptional activator demeter 0.0
Internal
sp_v1.1_unigene55897 SustainPine v1.1 368
AutoFact: RAD51B; RAD51B; recombinase; K10869 RAD51-like protein 1 2.0e-21
FL-Next: sp=DNA repair protein RAD51 homolog 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rad51b recombinase 3.78711e-21
N-terminus
sp_v1.1_unigene57761 SustainPine v1.1 595
AutoFact: ATEME1B (ARABIDOPSIS ESSENTIAL MEIOTIC ENDONUCLEASE 1B); endonuclease 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: essential meiotic endonuclease 1b 0.0
Internal
sp_v1.1_unigene58088 SustainPine v1.1 344
AutoFact: DNA repair helicase UVH6 0.0
FL-Next: sp=DNA repair helicase UVH6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna repair helicase uvh6 0.0
Internal
sp_v1.1_unigene62131 SustainPine v1.1 205
AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9H8P5_POPTR 2.0e-23
FL-Next: sp=CHD3-type chromatin-remodeling factor PICKLE; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna repair and recombination protein 3.15259e-23
Internal
sp_v1.1_unigene62155 SustainPine v1.1 321
AutoFact: DNA repair metallo-beta-lactamase n=1 Tax=Medicago truncatula RepID=Q2HRV5_MEDTR 5.0e-17
FL-Next: sp=DNA cross-link repair protein SNM1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: snm1 (sensitive to nitrogen mustard 1) 9.92913e-17
Putative C-terminus
sp_v1.1_unigene65439 SustainPine v1.1 600
AutoFact: DNA-damage repair protein drt111, putative; K12840 splicing factor 45 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain