Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: DNA repair

Term: GO:0006281  Help

Source: GO from Blast2go

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene10886 SustainPine v1.1 660
• AutoFact: DNA helicase recq1, putative; K10899 ATP-dependent DNA helicase Q1 [EC:3.6.1.-] 3.0e-38
• FL-Next: sp=ATP-dependent DNA helicase Q-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dna helicase 1.17709e-43
Putative N-terminus
sp_v1.1_unigene11005 SustainPine v1.1 484
• AutoFact: DNA helicase recq1, putative; K10899 ATP-dependent DNA helicase Q1 [EC:3.6.1.-] 2.0e-14
• FL-Next: sp=ATP-dependent DNA helicase Q-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dna helicase 1.79087e-18
N-terminus
sp_v1.1_unigene11454 SustainPine v1.1 458
• AutoFact: DNA photolyase, putative n=1 Tax=Ricinus communis RepID=B9SPQ6_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: cryptochrome dash 0.0
Internal
sp_v1.1_unigene11773 SustainPine v1.1 864
• AutoFact: holiday junction resolvase, S1x1p, URI domain nuclease 1.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene12067 SustainPine v1.1 378
• AutoFact: DNA damage-binding protein, putative; K10140 DNA damage-binding protein 2 0.0
• FL-Next: sp=Protein DAMAGED DNA-BINDING 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dna damage-binding 0.0
Internal
sp_v1.1_unigene12704 SustainPine v1.1 579
• AutoFact: ATP-dependent DNA helicase pcrA, putative 0.0
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Blast2go: atp-dependent dna helicase 0.0
Internal
sp_v1.1_unigene12874 SustainPine v1.1 2909
• AutoFact: Cryptochrome 1a n=3 Tax=Physcomitrella patens RepID=E1C9X9_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: blue-light photoreceptor 0.0
Complete
sp_v1.1_unigene13566 SustainPine v1.1 895
• AutoFact: PREDICTED: similar to DEAD/DEAH box helicase, putative n=1 Tax=Vitis vinifera RepID=UPI0001984985 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead deah box 0.0
Complete
sp_v1.1_unigene14397 SustainPine v1.1 592
• AutoFact: ap endonuclease, putative (EC:4.2.99.18); K10772 AP endonuclease 2 [EC:4.2.99.18] 2.0e-23
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: protein 2.92873e-39
N-terminus
sp_v1.1_unigene14514 SustainPine v1.1 942
• AutoFact: DNA-3-methyladenine glycosylase, putative n=1 Tax=Ricinus communis RepID=B9STQ9_RICCO 0.0
• FL-Next: tr=DNA-3-methyladenine glycosylase, putative; Ricinus communis (Castor bean). 0.0
• Blast2go: methyladenine glycosylase family protein 0.0
Internal
sp_v1.1_unigene17416 SustainPine v1.1 3461
• AutoFact: CUL4; cullin 4; K10609 cullin 4 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin-protein cullin 4 0.0
Complete
sp_v1.1_unigene17653 SustainPine v1.1 454
• AutoFact: rad1 DNA damage checkpoint protein, putative; K02830 cell cycle checkpoint protein [EC:3.1.11.2] 2.0e-28
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: rad1-like protein 1.88224e-28
Putative C-terminus
sp_v1.1_unigene17710 SustainPine v1.1 679
• AutoFact: Cell division protein ftsy, putative n=1 Tax=Ricinus communis RepID=B9RDL9_RICCO 1.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 5.60519e-44
C-terminus
sp_v1.1_unigene17738 SustainPine v1.1 1655
• AutoFact: DNA ligase n=2 Tax=Selaginella moellendorffii RepID=D8RMH0_SELML 0.0
• FL-Next: sp=DNA ligase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dna ligase 0.0
Internal
sp_v1.1_unigene18371 SustainPine v1.1 470
• AutoFact: ETG1; ETG1 (E2F TARGET GENE 1) 3.0e-14
• FL-Next: sp=Mini-chromosome maintenance complex-binding protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: etg1 (e2f target gene 1) 1.50659e-17
N-terminus
sp_v1.1_unigene18626 SustainPine v1.1 803
• AutoFact: ribonucleoside-diphosphate reductase (EC:1.17.4.1); K10808 ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene19273 SustainPine v1.1 2181
• AutoFact: FACT complex subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TYN6_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: fact complex subunit 0.0
N-terminus
sp_v1.1_unigene19630 SustainPine v1.1 1338
• AutoFact: Nucleosome assembly protein family n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TVZ4_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: nucleosome assembly protein 0.0
Putative Complete
sp_v1.1_unigene22934 SustainPine v1.1 1298
• AutoFact: NFA1501; nucleosome assembly protein family; K11279 nucleosome assembly protein 1-like 1 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: nucleosome assembly protein family 0.0
Putative Complete
sp_v1.1_unigene26261 SustainPine v1.1 636
• AutoFact: DNA glycosylase (Fragment) n=1 Tax=Populus trichocarpa RepID=B9MTP0_POPTR 0.0
• FL-Next: Isoform 2 of Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME 0.0
• Blast2go: dna glycosylase 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain