Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v1.1

Name: chloroplast organization

Term: GO:0009658  Help

Source: GO from Blast2go

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene32617 SustainPine v1.1 694
• AutoFact: PREDICTED: similar to membrane-associated zinc metalloprotease, putative isoform 2 n=1 Tax=Vitis vinifera RepID=UPI0001984455 2.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative N-terminus
sp_v1.1_unigene33569 SustainPine v1.1 1878
• AutoFact: CLPC1; CLPC1; ATP binding / ATP-dependent peptidase/ ATPase; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: atp-dependent protease 0.0
Putative Complete
sp_v1.1_unigene33862 SustainPine v1.1 771
• AutoFact: CLPB4; CLPB4 (CASEIN LYTIC PROTEINASE B4); ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding / protein binding 9.0e-31
• FL-Next: sp=Chaperone protein ClpB3, mitochondrial; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: protein 7.48453e-40
N-terminus
sp_v1.1_unigene36039 SustainPine v1.1 867
• AutoFact: Protein translocase subunit secA, chloroplastic n=1 Tax=Spinacia oleracea RepID=SECA_SPIOL 0.0
• FL-Next: sp=Protein translocase subunit SecA, chloroplastic; Spinacia oleracea (Spinach). 0.0
• Blast2go: protein translocase subunit seca chloroplast precursor 0.0
Internal
sp_v1.1_unigene36612 SustainPine v1.1 529
• AutoFact: ATAB2; ATAB2; RNA binding 6.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 4.21791e-43
C-terminus
sp_v1.1_unigene40214 SustainPine v1.1 313
• AutoFact: Protein translocase subunit secA n=1 Tax=Ricinus communis RepID=B9RN40_RICCO 0.0
• FL-Next: sp=Protein translocase subunit SecA, chloroplastic; Pisum sativum (Garden pea). 0.0
• Blast2go: protein translocase subunit seca chloroplast precursor 0.0
Internal
sp_v1.1_unigene40819 SustainPine v1.1 348
• AutoFact: membrane-associated zinc metalloprotease, putative 1.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
sp_v1.1_unigene41841 SustainPine v1.1 342
• AutoFact: Transporter ATM1, mitochondrial, putative n=1 Tax=Ricinus communis RepID=B9T3V9_RICCO 1.0e-24
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Blast2go: abc transporter family of the mitochondria family 2.21312e-24
Internal
sp_v1.1_unigene43526 SustainPine v1.1 408
• AutoFact: PREDICTED: similar to Protein translocase subunit secA, chloroplastic n=1 Tax=Vitis vinifera RepID=UPI0001983A2B 0.0
• FL-Next: sp=Protein translocase subunit SecA, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein translocase subunit seca chloroplast precursor 0.0
Internal
sp_v1.1_unigene44245 SustainPine v1.1 305
• AutoFact: RNEE/G; RNEE/G (RNASE E/G-LIKE); endoribonuclease 3.0e-33
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: rnase e g-like protein 1.88906e-36
Internal
sp_v1.1_unigene44960 SustainPine v1.1 412
• AutoFact: ribonuclease II, putative (EC:3.1.13.1) 3.0e-27
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: ribonuclease ii-like protein 1.22305e-27
C-terminus
sp_v1.1_unigene46260 SustainPine v1.1 308
• AutoFact: DNA polymerase n=1 Tax=Ricinus communis RepID=B9RF68_RICCO 3.0e-22
• FL-Next: sp=Zinc finger protein VAR3, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dna polymerase zeta catalytic 4.50061e-22
Internal
sp_v1.1_unigene49871 SustainPine v1.1 531
• AutoFact: pentatricopeptide (PPR) repeat-containing protein 9.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 6.05597e-35
Internal
sp_v1.1_unigene50248 SustainPine v1.1 187
• AutoFact: PREDICTED: similar to Protein translocase subunit secA, chloroplastic n=1 Tax=Vitis vinifera RepID=UPI0001983A2B 2.0e-22
• FL-Next: sp=Protein translocase subunit SecA, chloroplastic; Spinacia oleracea (Spinach). 0.0
• Blast2go: protein translocase subunit seca chloroplast precursor 4.61865e-22
Internal
sp_v1.1_unigene54152 SustainPine v1.1 220
• AutoFact: Protein translocase subunit secA, chloroplastic n=1 Tax=Spinacia oleracea RepID=SECA_SPIOL 8.0e-16
• FL-Next: sp=Protein translocase subunit SecA, chloroplastic; Spinacia oleracea (Spinach). 0.0
• Blast2go: protein translocase subunit seca chloroplast precursor 1.4422e-15
Internal
sp_v1.1_unigene55015 SustainPine v1.1 348
• AutoFact: Os02g0181900 protein (Fragment) n=1 Tax=Oryza sativa Japonica Group RepID=Q0E3C8_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: chaperone clpb expressed 0.0
Internal
sp_v1.1_unigene55426 SustainPine v1.1 155
• AutoFact: ATP-binding cassette transporter (Fragment) n=2 Tax=Selaginella moellendorffii RepID=D8RT17_SELML 1.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: abc transporter family of the mitochondria family 2.61089e-17
Putative C-terminus
sp_v1.1_unigene56053 SustainPine v1.1 512
• AutoFact: pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] sp|Q9M9E2.1|PPR45_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g15510, chloroplastic; Flags: Precursor gb|AAF71977.1|AC013453_2 Hypothetical protein [Arabidopsi 3.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 9.33825e-42
Internal
sp_v1.1_unigene60543 SustainPine v1.1 984
• AutoFact: RuBisCO large subunit-binding protein subunit alpha, chloroplastic (Fragment) n=4 Tax=Poaceae RepID=RUBA_WHEAT 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rubisco subunit binding-protein alpha subunit 0.0
Putative Complete
sp_v1.1_unigene64937 SustainPine v1.1 412
• AutoFact: ATP-dependent Clp protease proteolytic subunit n=1 Tax=Picea sitchensis RepID=A9NTR6_PICSI 6.0e-27
• FL-Next: sp=ATP-dependent Clp protease proteolytic subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: atp-dependent clp protease proteolytic 1.1858e-26
C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain