Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: chloroplast organization

Term: GO:0009658  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene14266 SustainPine v1.1 2715
AutoFact: dynamin, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene14751 SustainPine v1.1 727
AutoFact: ClpB heat shock protein-like n=2 Tax=Arabidopsis RepID=Q9LF37_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
sp_v1.1_unigene16267 SustainPine v1.1 755
AutoFact: ATAB2; ATAB2; RNA binding 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v1.1_unigene16642 SustainPine v1.1 1113
AutoFact: Os11g0181500 protein n=2 Tax=Oryza sativa RepID=Q0IU70_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nitrogen fixation protein 0.0
Complete
sp_v1.1_unigene17841 SustainPine v1.1 843
AutoFact: CLPC1; CLPC1; ATP binding / ATP-dependent peptidase/ ATPase; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC 0.0
FL-Next: sp=ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
Blast2go: atp-dependent clp protease 0.0
N-terminus
sp_v1.1_unigene18590 SustainPine v1.1 2598
AutoFact: CPN60A; CPN60A (CHAPERONIN-60ALPHA); ATP binding / protein binding 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rubisco subunit binding-protein alpha subunit 0.0
Complete
sp_v1.1_unigene19308 SustainPine v1.1 405
AutoFact: NifU domain containing protein 3.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nitrogen fixation like protein 3.57152e-19
Putative Complete
sp_v1.1_unigene19825 SustainPine v1.1 2331
AutoFact: CPN60A; CPN60A (CHAPERONIN-60ALPHA); ATP binding / protein binding 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rubisco subunit binding-protein alpha subunit 0.0
Complete
sp_v1.1_unigene23784 SustainPine v1.1 1630
AutoFact: ATP-dependent Clp protease proteolytic subunit n=1 Tax=Picea sitchensis RepID=A9NTE8_PICSI 0.0
FL-Next: sp=ATP-dependent Clp protease proteolytic subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene23854 SustainPine v1.1 1704
AutoFact: Triosephosphate isomerase n=2 Tax=Picea sitchensis RepID=A9NUV2_PICSI 0.0
FL-Next: sp=Triosephosphate isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: triosephosphate isomerase 0.0
Complete
sp_v1.1_unigene24118 SustainPine v1.1 1030
AutoFact: CDT1A; CDT1A (ARABIDOPSIS HOMOLOG OF YEAST CDT1 A); cyclin-dependent protein kinase/ protein binding 2.0e-35
FL-Next: sp=CDT1-like protein a, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cdt1a (arabidopsis homolog of yeast cdt1 a) cyclin-dependent protein kinase protein binding 2.20107e-37
Internal
sp_v1.1_unigene25659 SustainPine v1.1 1298
AutoFact: Chaperone clpb, putative n=1 Tax=Ricinus communis RepID=B9SJA7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
sp_v1.1_unigene26048 SustainPine v1.1 998
AutoFact: ATP-dependent clp protease, putative; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-dependent clp 0.0
Putative C-terminus
sp_v1.1_unigene26414 SustainPine v1.1 1598
AutoFact: Mitochondrial carrier protein, putative n=1 Tax=Ricinus communis RepID=B9SW87_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitochondrial carrier 0.0
Complete
sp_v1.1_unigene26569 SustainPine v1.1 1333
AutoFact: Nitrogen fixation protein nifU, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nitrogen fixation protein 0.0
Complete
sp_v1.1_unigene26664 SustainPine v1.1 985
AutoFact: ATP-dependent Clp protease proteolytic subunit (Fragment) n=1 Tax=Vitis vinifera RepID=D7TPZ3_VITVI 0.0
FL-Next: sp=ATP-dependent Clp protease proteolytic subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: clp-like energy-dependent protease 0.0
C-terminus
sp_v1.1_unigene26804 SustainPine v1.1 768
AutoFact: ATP-binding cassette transporter, subfamily B, member 10, group ATM protein PpABCB10 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TV53_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-binding cassette transporter 0.0
C-terminus
sp_v1.1_unigene27461 SustainPine v1.1 957
AutoFact: Transporter ATM1, mitochondrial precursor, putative (EC:3.6.3.44) 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abc transporter family of the mitochondria family 0.0
Internal
sp_v1.1_unigene30543 SustainPine v1.1 975
AutoFact: ATP-dependent Clp protease proteolytic subunit n=1 Tax=Picea sitchensis RepID=D5A7Z0_PICSI 0.0
FL-Next: sp=ATP-dependent Clp protease proteolytic subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: clp-like energy-dependent protease 0.0
Putative Complete
sp_v1.1_unigene31103 SustainPine v1.1 1349
AutoFact: Chaperone clpb, putative n=1 Tax=Ricinus communis RepID=B9SJA7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain