Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v1.1

Name: intracellular

Term: GO:0005622  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene18005 SustainPine v1.1 1703
AutoFact: exonuclease family protein 0.0
FL-Next: sp=Oligoribonuclease; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: exonuclease family protein 0.0
Complete
sp_v1.1_unigene18485 SustainPine v1.1 1248
AutoFact: [R] COG5210 GTPase-activating protein 9.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene18508 SustainPine v1.1 1303
AutoFact: exonuclease family protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: exonuclease iii protein 0.0
C-terminus
sp_v1.1_unigene18647 SustainPine v1.1 818
AutoFact: CNH domain containing protein 8.0e-11
Blast2go: rho guanyl nucleotide exchange factor 3.7524e-17
Coding
sp_v1.1_unigene18816 SustainPine v1.1 546
AutoFact: nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] dbj|BAB09056.1| unnamed protein product [Arabidopsis thaliana] gb|AAL86001.1| unknown protein [Arabidopsis thaliana] gb|AAM45065.1| un 7.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 2.15543e-24
N-terminus
sp_v1.1_unigene19904 SustainPine v1.1 1128
AutoFact: ADP-ribosylation factor-like protein n=9 Tax=core eudicotyledons RepID=Q9LFJ7_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: arf6 -family small gtpase 0.0
Complete
sp_v1.1_unigene19923 SustainPine v1.1 362
AutoFact: Dicer-like 4 n=1 Tax=Physcomitrella patens RepID=B3SRQ1_9BRYO 5.0e-12
FL-Next: sp=Dicer-like protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dsrna-specific nuclease dicer and related ribonuclease 9.35761e-12
Internal
sp_v1.1_unigene21514 SustainPine v1.1 1302
AutoFact: 50S ribosomal protein L18 family 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene22113 SustainPine v1.1 1000
AutoFact: Ribosomal protein L24 n=1 Tax=Cucumis melo var. cantalupensis RepID=B5AJV4_CUCMR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: kow domain-containing protein 0.0
Complete
sp_v1.1_unigene22612 SustainPine v1.1 784
AutoFact: 40S ribosomal protein S21e, putative; K02971 small subunit ribosomal protein S21e 1.0e-35
FL-Next: sp=40S ribosomal protein S21; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 2.11138e-38
Complete
sp_v1.1_unigene23701 SustainPine v1.1 597
AutoFact: GTP-binding protein SAR1A 2.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gtp-binding protein sar1a 3.04991e-23
N-terminus
sp_v1.1_unigene24423 SustainPine v1.1 708
AutoFact: Poly-ubiquitin n=2 Tax=Eukaryota RepID=O59964_MAGGR 0.0
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Blast2go: polyubiquitin 0.0
Putative Complete
sp_v1.1_unigene25361 SustainPine v1.1 632
AutoFact: UBI3; ubiquitin-ribosomal protein fusion that gives rise to cytoplasmic ribosomal small subunit protein S27a; can functionally substitute for S. cerevisiae RPS31 (YLR167W); has N terminal extension of 42 amino acids compared to EMBL sequence (CAA75692) 7.0e-31
FL-Next: sp=Ubiquitin; Avena sativa (Oat). 0.0
Blast2go: ubiquitin-ribosomal protein fusion s27a 1.32255e-30
Complete
sp_v1.1_unigene25783 SustainPine v1.1 977
AutoFact: 40S ribosomal protein S17 n=3 Tax=Solanoideae RepID=RS17_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein s17 0.0
Complete
sp_v1.1_unigene26627 SustainPine v1.1 292
AutoFact: UBI3; ubiquitin-ribosomal protein fusion that gives rise to cytoplasmic ribosomal small subunit protein S27a; can functionally substitute for S. cerevisiae RPS31 (YLR167W); has N terminal extension of 42 amino acids compared to EMBL sequence (CAA75692) 1.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-ribosomal protein fusion s27a 7.79128e-30
N-terminus
sp_v1.1_unigene27676 SustainPine v1.1 1289
AutoFact: Os01g0872700 protein n=3 Tax=Oryza sativa RepID=Q5N739_ORYSJ 5.0e-39
FL-Next: sp=5'-3' exoribonuclease 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: 5 - 2.50333e-39
C-terminus
sp_v1.1_unigene27803 SustainPine v1.1 813
AutoFact: ribisomal protein L13 family protein; K02871 large subunit ribosomal protein L13 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 50s ribosomal protein 0.0
Putative Complete
sp_v1.1_unigene28380 SustainPine v1.1 382
AutoFact: Phosphoprotein phosphatase, putative n=1 Tax=Ricinus communis RepID=B9RA78_RICCO 1.0e-11
FL-Next: tr=Propyzamide-hypersensitive 1; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: phs1 (propyzamide-hypersensitive 1) phosphoprotein phosphatase protein tyrosine serine threonine phosphatase 9.47036e-12
Internal
sp_v1.1_unigene28506 SustainPine v1.1 1342
AutoFact: 50S ribosomal protein L1 n=1 Tax=Zea mays RepID=B6TB66_MAIZE 0.0
FL-Next: sp=50S ribosomal protein L1, chloroplastic; Porphyra yezoensis. Plastid; Chloroplast. 0.0
Blast2go: 50s ribosomal protein l1 0.0
Complete
sp_v1.1_unigene28712 SustainPine v1.1 1581
AutoFact: similar to ADP-ribosylation factor 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: adp-ribosylation factor 0.0
Complete

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain