Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: nucleolus

Term: GO:0005730  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene93 SustainPine v1.1 1628
AutoFact: UTP15_C multi-domain protein 9.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v1.1_unigene939 SustainPine v1.1 1926
AutoFact: N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Picea sitchensis RepID=A9NUH1_PICSI 0.0
FL-Next: sp=N-acetyl-gamma-glutamyl-phosphate reductase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene972 SustainPine v1.1 1748
AutoFact: Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9SWQ3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine protein 0.0
Complete
sp_v1.1_unigene1176 SustainPine v1.1 1561
AutoFact: ATP-dependent RNA helicase, putative; K12820 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:3.6.4.13] 0.0
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Putative N-terminus
sp_v1.1_unigene1401 SustainPine v1.1 1136
AutoFact: Unassigned protein
FL-Next: Isoform 2 of Pumilio homolog 23 OS=Arabidopsis thaliana GN=APUM23 0.0
Blast2go: protein 0.0
Internal
sp_v1.1_unigene1428 SustainPine v1.1 2508
AutoFact: ATP-dependent RNA helicase, putative; K12820 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:3.6.4.13] 0.0
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene1448 SustainPine v1.1 1725
AutoFact: ZNF330; zinc finger protein 330 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: zinc finger protein 330 0.0
Putative Complete
sp_v1.1_unigene1543 SustainPine v1.1 1400
AutoFact: APUM24; APUM24 (Arabidopsis Pumilio 24); RNA binding / binding 0.0
FL-Next: sp=Pumilio homolog 24; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene1654 SustainPine v1.1 1378
AutoFact: transducin family protein / WD-40 repeat family protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd repeat domain 12 0.0
Complete
sp_v1.1_unigene1883 SustainPine v1.1 1973
AutoFact: brix domain containing protein, putative 0.0
FL-Next: sp=Ribosome production factor 2 homolog; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene2203 SustainPine v1.1 1603
AutoFact: set domain protein, putative (EC:2.1.1.43) 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: set domain 0.0
Complete
sp_v1.1_unigene2290 SustainPine v1.1 2060
AutoFact: DEAD/DEAH box helicase, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead box rna helicase 0.0
Putative Complete
sp_v1.1_unigene2369 SustainPine v1.1 1082
AutoFact: Probable pre-mRNA-splicing factor ATP-dependent RNA helicase n=2 Tax=Arabidopsis thaliana RepID=DHX15_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-dependent rna 0.0
Putative N-terminus
sp_v1.1_unigene2703 SustainPine v1.1 1222
AutoFact: Dihydrolipoyl dehydrogenase n=1 Tax=Picea sitchensis RepID=B8LKS4_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: at3g16950 k14a17_7 0.0
N-terminus
sp_v1.1_unigene2827 SustainPine v1.1 3115
AutoFact: 116 kD U5 small nuclear ribonucleoprotein component, putative; K12852 116 kDa U5 small nuclear ribonucleoprotein component 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: elongation factor tu gtp-binding domain protein 2 0.0
Putative Complete
sp_v1.1_unigene2855 SustainPine v1.1 1416
AutoFact: prohibitin, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene3861 SustainPine v1.1 254
AutoFact: DNA helicase, TBP-interacting protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TL22_PHYPA 9.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ruvb-like 2 4.5671e-38
Internal
sp_v1.1_unigene3907 SustainPine v1.1 2424
AutoFact: U3 small nucleolar RNA-associated protein, putative (EC:2.7.11.7) 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd40-repeat protein 0.0
Putative Complete
sp_v1.1_unigene3987 SustainPine v1.1 2133
AutoFact: Arsenite-resistance protein, putative n=1 Tax=Ricinus communis RepID=B9S6M6_RICCO 0.0
FL-Next: sp=Serrate RNA effector molecule; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: c2h2 zinc-finger protein 0.0
C-terminus
sp_v1.1_unigene4106 SustainPine v1.1 1774
AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9R9L5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna helicase 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain