Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: nucleolus

Term: GO:0005730  Help

Source: GO from Blast2go

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene22184 SustainPine v1.1 1870
• AutoFact: PKT3; PKT3 (PEROXISOMAL 3-KETOACYL-COA THIOLASE 3); acetyl-CoA C-acyltransferase (EC:2.3.1.16); K00632 acetyl-CoA acyltransferase [EC:2.3.1.16] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 3-ketoacyl- thiolase 0.0
Complete
sp_v1.1_unigene22305 SustainPine v1.1 905
• AutoFact: Nuclear protein skip, putative n=1 Tax=Ricinus communis RepID=B9SX87_RICCO 2.0e-23
• FL-Next: tr=Nuclear protein skip, putative; Ricinus communis (Castor bean). 0.0
• Blast2go: nuclear protein 3.23581e-23
C-terminus
sp_v1.1_unigene22350 SustainPine v1.1 2362
• AutoFact: Nucleolar protein nop56, putative n=1 Tax=Ricinus communis RepID=B9RAI8_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: nucleolar protein 0.0
Complete
sp_v1.1_unigene22485 SustainPine v1.1 1031
• AutoFact: 40S ribosomal protein S18 (RPS18B) 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pointed first leaf 0.0
Complete
sp_v1.1_unigene22648 SustainPine v1.1 658
• AutoFact: gpm447; LOC100282946; K02983 small subunit ribosomal protein S30e 8.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 40s ribosomal protein s30 1.63696e-21
Complete
sp_v1.1_unigene22721 SustainPine v1.1 2222
• AutoFact: Pre-mRNA-splicing factor, putative; K10599 pre-mRNA-processing factor 19 [EC:6.3.2.19] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin-protein pub59 0.0
Complete
sp_v1.1_unigene22869 SustainPine v1.1 1153
• AutoFact: HSP20 domain containing protein 5.0e-05
• FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
• Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene22950 SustainPine v1.1 358
• AutoFact: DNA helicase, TBP-interacting protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RE67_PHYPA 5.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dna tbp-interacting protein 2.39582e-15
N-terminus
sp_v1.1_unigene22998 SustainPine v1.1 1814
• AutoFact: U2 small nuclear ribonucleoprotein A n=1 Tax=Gossypium hirsutum RepID=D6N3G9_GOSHI 0.0
• FL-Next: sp=U2 small nuclear ribonucleoprotein A'; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: u2 small nuclear ribonucleoprotein a 0.0
Complete
sp_v1.1_unigene23014 SustainPine v1.1 1919
• AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 1.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: heterogeneous nuclear ribonucleoprotein 0.0
Complete
sp_v1.1_unigene23052 SustainPine v1.1 702
• AutoFact: 40S ribosomal protein S20, putative; K02969 small subunit ribosomal protein S20e 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 40s ribosomal protein s20 0.0
Complete
sp_v1.1_unigene23072 SustainPine v1.1 1017
• AutoFact: ribosome biogenesis regulatory protein, putative 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ribosome biogenesis regulatory protein family protein 0.0
N-terminus
sp_v1.1_unigene23256 SustainPine v1.1 938
• AutoFact: 60S ribosomal protein L24, putative; K02896 large subunit ribosomal protein L24e 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative Complete
sp_v1.1_unigene23385 SustainPine v1.1 962
• AutoFact: gpm447; LOC100282946; K02983 small subunit ribosomal protein S30e 2.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 40s ribosomal protein s30 1.66092e-20
Complete
sp_v1.1_unigene23604 SustainPine v1.1 891
• AutoFact: small nuclear ribonucleoprotein G; K11099 small nuclear ribonucleoprotein G 5.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: small nuclear ribonucleoprotein g 1.90606e-36
Complete
sp_v1.1_unigene23654 SustainPine v1.1 1352
• AutoFact: small nuclear ribonucleoprotein G; K11099 small nuclear ribonucleoprotein G 1.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: small nuclear ribonucleoprotein g 3.62009e-36
Complete
sp_v1.1_unigene23669 SustainPine v1.1 1010
• AutoFact: 60S ribosomal protein L24, putative; K02896 large subunit ribosomal protein L24e 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 60s ribosomal protein 0.0
Complete
sp_v1.1_unigene23770 SustainPine v1.1 2058
• AutoFact: DEAD-box ATP-dependent RNA helicase 2 n=7 Tax=Poaceae RepID=RH2_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: nicotiana eukaryotic translation initiation factor 4a 0.0
Complete
sp_v1.1_unigene23785 SustainPine v1.1 837
• AutoFact: Histone H4 n=1 Tax=Zea mays RepID=B6TJ90_MAIZE 7.0e-38
• FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: histone h4 5.31751e-38
Complete
sp_v1.1_unigene23827 SustainPine v1.1 1004
• AutoFact: Histone H4 n=1 Tax=Zea mays RepID=B6TJ90_MAIZE 9.0e-38
• FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: histone h4 7.23121e-38
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain