Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: nucleolus

Term: GO:0005730  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene17130 SustainPine v1.1 1119
AutoFact: EMB2271 (EMBRYO DEFECTIVE 2271); nucleotide binding 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene17191 SustainPine v1.1 1075
AutoFact: Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S8J4_PHYPA 3.00018e-42
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: nuclear protein 0.0
C-terminus
sp_v1.1_unigene17284 SustainPine v1.1 553
AutoFact: Histone H4 n=1 Tax=Zea mays RepID=B6TJ90_MAIZE 3.0e-38
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h4 2.08532e-38
Complete
sp_v1.1_unigene17520 SustainPine v1.1 1412
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene17577 SustainPine v1.1 1828
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene17635 SustainPine v1.1 557
AutoFact: pre-mRNA-splicing factor ATP-dependent RNA helicase; K12820 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:3.6.4.13] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus
sp_v1.1_unigene17762 SustainPine v1.1 440
AutoFact: 60S ribosomal protein L14 (RPL14B); K02875 large subunit ribosomal protein L14e 8.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l14 1.34525e-28
Putative Complete
sp_v1.1_unigene17963 SustainPine v1.1 1912
AutoFact: 26S protease regulatory subunit S10b, putative (EC:3.6.4.3); K03064 26S proteasome regulatory subunit T4 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 26s protease regulatory subunit 0.0
Complete
sp_v1.1_unigene17977 SustainPine v1.1 418
AutoFact: ATRPS13A (ARABIDOPSIS THALIANA RIBOSOMAL PROTEIN S13A); structural constituent of ribosome; K02953 small subunit ribosomal protein S13e 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene18367 SustainPine v1.1 1673
AutoFact: DNA-directed RNA polymerase II subunit, putative; K03011 DNA-directed RNA polymerase II subunit C 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerase third largest subunit 0.0
Complete
sp_v1.1_unigene18459 SustainPine v1.1 1253
AutoFact: RPS3 n=1 Tax=Cymbidium hybrid cultivar RepID=A0N0S0_9ASPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein 0.0
Complete
sp_v1.1_unigene18562 SustainPine v1.1 1033
AutoFact: Histone H4 n=1 Tax=Zea mays RepID=B6TJ90_MAIZE 3.0e-30
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h4 2.6119e-30
Misassembled
sp_v1.1_unigene18710 SustainPine v1.1 1657
AutoFact: 60S acidic ribosomal protein P0 (RPP0A); K02941 large subunit ribosomal protein LP0 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s acidic ribosomal protein p0 0.0
Complete
sp_v1.1_unigene18957 SustainPine v1.1 862
AutoFact: acetyl-CoA C-acyltransferase (EC:2.3.1.16); K07513 acetyl-CoA acyltransferase 1 [EC:2.3.1.16] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 3-ketoacyl- thiolase 0.0
N-terminus
sp_v1.1_unigene18962 SustainPine v1.1 702
AutoFact: Histone H4 n=1 Tax=Zea mays RepID=B6TJ90_MAIZE 5.0e-38
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h4 3.78915e-38
Complete
sp_v1.1_unigene19117 SustainPine v1.1 1866
AutoFact: DEAD-box ATP-dependent RNA helicase 2 n=7 Tax=Poaceae RepID=RH2_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nicotiana eukaryotic translation initiation factor 4a 0.0
Complete
sp_v1.1_unigene19119 SustainPine v1.1 1957
AutoFact: 60S ribosomal protein-related 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene19248 SustainPine v1.1 705
AutoFact: Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9SWQ3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine protein 0.0
Internal
sp_v1.1_unigene19251 SustainPine v1.1 625
AutoFact: Nuclear protein skip, putative n=1 Tax=Ricinus communis RepID=B9SX87_RICCO 3.0e-37
FL-Next: tr=Nuclear protein skip, putative; Ricinus communis (Castor bean). 0.0
Blast2go: nuclear protein 1.85086e-37
C-terminus
sp_v1.1_unigene19343 SustainPine v1.1 453
AutoFact: 40S ribosomal protein S18 (RPS18B) 2.8026e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pointed first leaf 1.4013e-45
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain