Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: nucleolus

Term: GO:0005730  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene15794 SustainPine v1.1 1674
AutoFact: 3-phosphoinositide-dependent protein kinase-1, putative 3.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 3-phosphoinositide-dependent protein kinase- 0.0
Complete
sp_v1.1_unigene15800 SustainPine v1.1 334
AutoFact: similar to polyubiquitin; K08770 ubiquitin C 0.0
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Blast2go: polyubiquitin 0.0
Putative N-terminus
sp_v1.1_unigene15856 SustainPine v1.1 2083
AutoFact: 26S protease regulatory subunit S10b, putative (EC:3.6.4.3); K03064 26S proteasome regulatory subunit T4 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 26s protease regulatory subunit 0.0
Complete
sp_v1.1_unigene15880 SustainPine v1.1 1265
AutoFact: predicted protein; K08770 ubiquitin C 0.0
FL-Next: sp=Polyubiquitin 14; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ubiquitin 0.0
Complete
sp_v1.1_unigene16067 SustainPine v1.1 747
AutoFact: Cinnamoyl-CoA reductase n=3 Tax=Pinaceae RepID=B3VKE9_9CONI 0.0
FL-Next: tr=Cinnamoyl-CoA reductase; Pinus massoniana. 0.0
Blast2go: cinnamoyl reductase 0.0
Internal
sp_v1.1_unigene16117 SustainPine v1.1 1366
AutoFact: 60S ribosomal protein L4 n=1 Tax=Prunus armeniaca RepID=RL4_PRUAR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l4 l1 0.0
Complete
sp_v1.1_unigene16121 SustainPine v1.1 1867
AutoFact: nucleolar protein nop56, putative 0.0
FL-Next: sp=Probable nucleolar protein 5-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: nucleolar protein 0.0
N-terminus
sp_v1.1_unigene16174 SustainPine v1.1 993
AutoFact: Polyubiquitin n=1 Tax=Volvox carteri f. nagariensis RepID=D8U995_VOLCA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polyubiquitin 2 0.0
Complete
sp_v1.1_unigene16281 SustainPine v1.1 1175
AutoFact: predicted protein; K08770 ubiquitin C 0.0
FL-Next: sp=Polyubiquitin 14; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ubiquitin 0.0
Complete
sp_v1.1_unigene16374 SustainPine v1.1 924
AutoFact: putative Peptidyl Prolyl cis-trans isomerase [Oryza sativa Japonica Group] 5.0e-24
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: at4g25340 t30c3_20 1.07905e-29
N-terminus
sp_v1.1_unigene16379 SustainPine v1.1 1004
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_36.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=E0CU96_VITVI 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: polyubiquitin 0.0
Complete
sp_v1.1_unigene16394 SustainPine v1.1 1520
AutoFact: pre-mRNA-splicing factor prp45; K06063 SNW domain-containing protein 1 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: nuclear protein 0.0
N-terminus
sp_v1.1_unigene16414 SustainPine v1.1 1071
AutoFact: Elongation factor Tu n=2 Tax=Picea sitchensis RepID=A9NWL9_PICSI 0.0
FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chloroplast elongation factor tub 0.0
C-terminus
sp_v1.1_unigene16490 SustainPine v1.1 1341
AutoFact: 40S ribosomal protein S4, putative; K02987 small subunit ribosomal protein S4e 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein s4 0.0
Complete
sp_v1.1_unigene16565 SustainPine v1.1 1196
AutoFact: EMB2271 (EMBRYO DEFECTIVE 2271); nucleotide binding 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene16646 SustainPine v1.1 928
AutoFact: 60S ribosomal protein L24, putative; K02896 large subunit ribosomal protein L24e 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene16780 SustainPine v1.1 702
AutoFact: similar to polyubiquitin; K08770 ubiquitin C 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: polyubiquitin 0.0
Complete
sp_v1.1_unigene16925 SustainPine v1.1 1378
AutoFact: RNA binding protein-like protein n=1 Tax=Solanum tuberosum RepID=Q2VCH8_SOLTU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 0.0
Complete
sp_v1.1_unigene17027 SustainPine v1.1 709
AutoFact: Histone H4 n=1 Tax=Zea mays RepID=B6TJ90_MAIZE 2.0e-38
FL-Next: sp=Histone H4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: histone h4 2.91299e-38
Complete
sp_v1.1_unigene17072 SustainPine v1.1 1101
AutoFact: Proliferating cell nuclear antigen n=16 Tax=Spermatophyta RepID=PCNA_CATRO 0.0
FL-Next: sp=Proliferating cell nuclear antigen; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: proliferating cell nuclear antigen 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain