Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: regulation of cellular transcription, DNA-dependent

Term: GO:0045449  Help

Source: GO from Blast2go

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene10489 SustainPine v1.1 644
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative N-terminus
sp_v1.1_unigene10551 SustainPine v1.1 805
• AutoFact: Putative basic helix-loop-helix protein BHLH25 n=1 Tax=Lotus japonicus RepID=C0JP31_LOTJA 2.0e-20
• FL-Next: sp=Transcription factor bHLH30; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: basic helix-loop-helix family protein 2.90933e-22
Putative N-terminus
sp_v1.1_unigene10594 SustainPine v1.1 883
• AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RAB3_RICCO 2.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dna binding 0.0
N-terminus
sp_v1.1_unigene10604 SustainPine v1.1 1502
• AutoFact: STOP1; STOP1 (sensitive to proton rhizotoxicity 1); nucleic acid binding / transcription factor/ zinc ion binding 1.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: c2-h2 zinc finger protein 2.21718e-13
Putative C-terminus
sp_v1.1_unigene10856 SustainPine v1.1 686
• AutoFact: Helix-loop-helix protein 1A n=1 Tax=Pinus taeda RepID=Q9SQ79_PINTA 0.0
• FL-Next: tr=Helix-loop-helix protein 1A; Pinus taeda (Loblolly pine). 0.0
• Blast2go: helix-loop-helix protein 1 a 0.0
Internal
sp_v1.1_unigene10999 SustainPine v1.1 920
• AutoFact: Activating signal cointegrator, putative n=1 Tax=Ricinus communis RepID=B9R996_RICCO 0.0
• FL-Next: tr=Activating signal cointegrator, putative; Ricinus communis (Castor bean). 0.0
• Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene11186 SustainPine v1.1 1405
• AutoFact: Myc2 bHLH protein n=2 Tax=Vitis vinifera RepID=A6NAB4_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: basic helix-loop-helix family protein 0.0
N-terminus
sp_v1.1_unigene11206 SustainPine v1.1 459
• AutoFact: AFC1; AFC1 (ARABIDOPSIS FUS3-COMPLEMENTING GENE 1); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase 1.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 2.59565e-30
C-terminus
sp_v1.1_unigene11214 SustainPine v1.1 1967
• AutoFact: R2R3-Myb4 transcription factor (Fragment) n=1 Tax=Pinus pinaster RepID=B1PPT6_PINPS 0.0
• FL-Next: tr=R2R3-MYB transcription factor MYB4; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: protein 0.0
Putative Complete
sp_v1.1_unigene11217 SustainPine v1.1 1114
• AutoFact: POL; POL (poltergeist); protein serine/threonine phosphatase 1.0e-35
• FL-Next: sp=Protein phosphatase 2C 32; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 5.65978e-38
Internal
sp_v1.1_unigene11456 SustainPine v1.1 698
• AutoFact: Squamosa promoter-binding protein, putative 3.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: squamosa promoter-binding 1.77575e-40
Putative C-terminus
sp_v1.1_unigene11598 SustainPine v1.1 915
• AutoFact: DNA binding protein, putative 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: myb transcription factor 0.0
N-terminus
sp_v1.1_unigene11895 SustainPine v1.1 1546
• AutoFact: NAC domain-containing protein, putative 1.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: nac domain ipr003441 0.0
C-terminus
sp_v1.1_unigene11913 SustainPine v1.1 699
• AutoFact: Putative MADS box transcription factor PrMADS9 n=1 Tax=Pinus radiata RepID=O24487_PINRA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: mads box transcription factor 9 0.0
Complete
sp_v1.1_unigene12078 SustainPine v1.1 1458
• AutoFact: GRAS family transcription factor n=2 Tax=Populus trichocarpa RepID=B9GKM9_POPTR 0.0
• FL-Next: tr=SCARECROW; Pinus sylvestris (Scots pine). 0.0
• Blast2go: gras family transcription factor 0.0
Internal
sp_v1.1_unigene12175 SustainPine v1.1 917
• AutoFact: TPA_inf: class IV HD-Zip protein HDZ43 [Physcomitrella patens] 0.0
• FL-Next: tr=Homeodomain protein HB2; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Blast2go: tpa_inf: class iv hd-zip protein hdz41 0.0
Internal
sp_v1.1_unigene12269 SustainPine v1.1 631
• AutoFact: MYB8 transcription factor n=3 Tax=Pinaceae RepID=D7GLD4_PINPS 1.0e-20
• FL-Next: tr=MYB8 transcription factor; Pinus pinaster (Maritime pine). 0.0
• Blast2go: r2r3-myb transcription factor myb8 1.95179e-20
C-terminus
sp_v1.1_unigene12280 SustainPine v1.1 672
• AutoFact: Class III HD-Zip protein HDZ34 (Fragment) n=1 Tax=Pinus taeda RepID=Q0Q418_PINTA 0.0
• FL-Next: tr=Class III homeodomain leucine zipper protein; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: class iii homeodomain-leucine zipper protein c3hdz1 0.0
Internal
sp_v1.1_unigene12301 SustainPine v1.1 1149
• AutoFact: nucleic acid binding protein, putative 2.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: nucleic acid binding 3.64338e-44
Internal
sp_v1.1_unigene12502 SustainPine v1.1 1555
• AutoFact: MYBCS1; Myb transcription factor 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain