Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: helicase activity

Term: GO:0004386  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene47 SustainPine v1.1 2545
AutoFact: predicted protein; K10843 DNA excision repair protein ERCC-3 [EC:3.6.1.-] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna repair and transcription factor xpb1 0.0
N-terminus
sp_v1.1_unigene1176 SustainPine v1.1 1561
AutoFact: ATP-dependent RNA helicase, putative; K12820 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:3.6.4.13] 0.0
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Putative N-terminus
sp_v1.1_unigene1428 SustainPine v1.1 2508
AutoFact: ATP-dependent RNA helicase, putative; K12820 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:3.6.4.13] 0.0
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene2043 SustainPine v1.1 2540
AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9R8Y0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-dependent rna 0.0
Putative Complete
sp_v1.1_unigene2369 SustainPine v1.1 1082
AutoFact: Probable pre-mRNA-splicing factor ATP-dependent RNA helicase n=2 Tax=Arabidopsis thaliana RepID=DHX15_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-dependent rna 0.0
Putative N-terminus
sp_v1.1_unigene4511 SustainPine v1.1 1708
AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9R8Y0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna helicase 0.0
Putative C-terminus
sp_v1.1_unigene4744 SustainPine v1.1 571
AutoFact: ATP-dependent RNA helicase, putative; K13117 ATP-dependent RNA helicase DDX35 [EC:3.6.4.13] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-dependent rna 0.0
Putative N-terminus
sp_v1.1_unigene6062 SustainPine v1.1 924
AutoFact: HEN2; HEN2 (hua enhancer 2); ATP-dependent helicase/ RNA helicase 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hua enhancer 2 0.0
C-terminus
sp_v1.1_unigene6762 SustainPine v1.1 753
AutoFact: ATP-dependent RNA helicase, putative; K12815 pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 [EC:3.6.4.13] 0.0
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
sp_v1.1_unigene10487 SustainPine v1.1 759
AutoFact: Chromatin remodelling complex ATPase chain isw-1, putative n=1 Tax=Ricinus communis RepID=B9S022_RICCO 7.0e-30
FL-Next: tr=Chromatin remodelling complex ATPase chain isw-1, putative; Ricinus communis (Castor bean). 0.0
Blast2go: chromatin remodelling complex atpase chain isw- 1.27684e-29
C-terminus
sp_v1.1_unigene11593 SustainPine v1.1 1048
AutoFact: CHR929; chromatin remodeling complex subunit; K11665 DNA helicase INO80 [EC:3.6.1.-] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chromatin remodeling complex subunit 0.0
Putative N-terminus
sp_v1.1_unigene12029 SustainPine v1.1 567
AutoFact: ATP-dependent RNA helicase, putative 3.99931e-42
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: deih-box rna dna helicase 0.0
Internal
sp_v1.1_unigene12655 SustainPine v1.1 741
AutoFact: SWR1 complex protein, SNF2 family DNA-dependent ATPase (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U2Y8_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: swr1 complex snf2 family dna-dependent atpase 0.0
Putative C-terminus
sp_v1.1_unigene12911 SustainPine v1.1 973
AutoFact: DUF3535 domain containing protein 3.0e-05
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: chromatin remodeling complex subunit 0.0
Internal
sp_v1.1_unigene13091 SustainPine v1.1 425
AutoFact: Chromatin remodeling complex SWI/SNF protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S7V7_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chromatin remodeling complex subunit 0.0
Internal
sp_v1.1_unigene13298 SustainPine v1.1 456
AutoFact: [KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family 4.0e-18
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: chromatin remodelling complex atpase chain isw- 0.0
Internal
sp_v1.1_unigene13893 SustainPine v1.1 2509
AutoFact: CHR929; chromatin remodeling complex subunit; K11665 DNA helicase INO80 [EC:3.6.1.-] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chromatin remodeling complex subunit 0.0
Complete
sp_v1.1_unigene14236 SustainPine v1.1 370
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9T6H9_RICCO 2.0e-37
FL-Next: sp=DNA helicase INO80; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: chromatin remodeling complex subunit 4.27804e-37
Internal
sp_v1.1_unigene15598 SustainPine v1.1 827
AutoFact: Ebp2 domain containing protein 3.0e-06
FL-Next: sp=DEAD-box ATP-dependent RNA helicase 28; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: predicted protein [Populus trichocarpa] 9.1349e-11
C-terminus
sp_v1.1_unigene17624 SustainPine v1.1 510
AutoFact: SWI2; SWI2 (SWITCH 2); ATP binding / DNA binding / helicase/ nucleic acid binding 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: snf2 super family 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain