Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: helicase activity

Term: GO:0004386  Help

Source: GO from Blast2go

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene18011 SustainPine v1.1 720
• AutoFact: DsRNA-specific nuclease dicer and related ribonuclease n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SIL6_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dicer-like protein 0.0
Internal
sp_v1.1_unigene19063 SustainPine v1.1 1262
• AutoFact: dead box ATP-dependent RNA helicase, putative 7.9874e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead box-like rna helicase 0.0
C-terminus
sp_v1.1_unigene19923 SustainPine v1.1 362
• AutoFact: Dicer-like 4 n=1 Tax=Physcomitrella patens RepID=B3SRQ1_9BRYO 5.0e-12
• FL-Next: sp=Dicer-like protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dsrna-specific nuclease dicer and related ribonuclease 9.35761e-12
Internal
sp_v1.1_unigene20387 SustainPine v1.1 714
• AutoFact: ATP-dependent RNA helicase, putative; K12820 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:3.6.4.13] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative N-terminus
sp_v1.1_unigene27178 SustainPine v1.1 1441
• AutoFact: ATP-dependent RNA helicase, putative; K12815 pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 [EC:3.6.4.13] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene28731 SustainPine v1.1 2251
• AutoFact: ATP-dependent RNA helicase, putative; K12820 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:3.6.4.13] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative Complete
sp_v1.1_unigene30047 SustainPine v1.1 1285
• AutoFact: PREDICTED: similar to EMB2733/ESP3 (EMBRYO DEFECTIVE 2733); ATP-dependent RNA helicase n=1 Tax=Vitis vinifera RepID=UPI00019851EB 0.0
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dead deah box helicase 0.0
Internal
sp_v1.1_unigene32910 SustainPine v1.1 481
• AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9R8Y0_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna helicase 0.0
Putative N-terminus
sp_v1.1_unigene34392 SustainPine v1.1 409
• AutoFact: pre-mRNA-splicing factor ATP-dependent RNA helicase; K12820 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:3.6.4.13] 4.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 7.90942e-35
Internal
sp_v1.1_unigene38773 SustainPine v1.1 397
• AutoFact: PREDICTED: similar to RECQSIM (Arabidopsis RecQ helicase sim); ATP-dependent helicase n=1 Tax=Vitis vinifera RepID=UPI00019849D7 1.0e-38
• FL-Next: sp=ATP-dependent DNA helicase Q-like SIM; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: atp-dependent dna helicase 2.67839e-38
Internal
sp_v1.1_unigene40470 SustainPine v1.1 373
• AutoFact: emb1507 (embryo defective 1507); ATP binding / ATP-dependent helicase/ helicase/ nucleic acid binding / nucleoside-triphosphatase/ nucleotide binding; K12854 pre-mRNA-splicing helicase BRR2 [EC:3.6.1.-] 5.0e-18
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: u5 small nuclear ribonucleoprotein helicase 3.63764e-19
N-terminus
sp_v1.1_unigene40986 SustainPine v1.1 392
• AutoFact: Pre-mRNA splicing factor ATP-dependent RNA helicase-like protein n=2 Tax=Arabidopsis RepID=Q9LXT8_ARATH 0.0
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 0.0
Internal
sp_v1.1_unigene45086 SustainPine v1.1 270
• AutoFact: similar to DNA Helicase; K10901 bloom syndrome protein [EC:3.6.1.-] 2.0e-23
• FL-Next: sp=ATP-dependent DNA helicase Q-like 4A; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dna helicase 4.84178e-24
Internal
sp_v1.1_unigene47419 SustainPine v1.1 196
• AutoFact: MEE29; MEE29 (maternal effect embryo arrest 29); ATP binding / ATP-dependent RNA helicase/ ATP-dependent helicase/ helicase/ nucleic acid binding 2.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pre-mrna-splicing factor atp-dependent rna helicase dhx16 1.79441e-26
Internal
sp_v1.1_unigene58490 SustainPine v1.1 385
• AutoFact: PREDICTED: similar to RECQSIM (Arabidopsis RecQ helicase sim); ATP-dependent helicase n=1 Tax=Vitis vinifera RepID=UPI00019849D7 0.0
• FL-Next: sp=ATP-dependent DNA helicase Q-like SIM; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 0.0
Internal
sp_v1.1_unigene61586 SustainPine v1.1 323
• AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9RMI9_RICCO 6.0e-39
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: atp-dependent rna 1.06894e-38
Internal
sp_v1.1_unigene63506 SustainPine v1.1 580
• AutoFact: ATP-dependent RNA helicase, putative; K12820 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:3.6.4.13] 3.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 5.37627e-38
Putative N-terminus
sp_v1.1_unigene66563 SustainPine v1.1 419
• AutoFact: emb1507 (embryo defective 1507); ATP binding / ATP-dependent helicase/ helicase/ nucleic acid binding / nucleoside-triphosphatase/ nucleotide binding; K12854 pre-mRNA-splicing helicase BRR2 [EC:3.6.1.-] 2.0e-22
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Blast2go: protein 5.47779e-23
N-terminus
sp_v1.1_unigene68835 SustainPine v1.1 430
• AutoFact: ATP-dependent RNA helicase, putative n=2 Tax=Arabidopsis thaliana RepID=Q9C7G2_ARATH 0.0
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: atp-dependent rna 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain