Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: chloroplast thylakoid membrane

Term: GO:0009535  Help

Source: GO from Blast2go

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene19066 SustainPine v1.1 686
• AutoFact: PSI-P; PSI-P (PHOTOSYSTEM I P SUBUNIT); DNA binding 6.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
N-terminus
sp_v1.1_unigene19218 SustainPine v1.1 1125
• AutoFact: Stress enhanced protein 1 n=1 Tax=Brassica rapa RepID=A8IXP9_BRACM 3.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: stress enhanced protein 1 0.0
Complete
sp_v1.1_unigene19468 SustainPine v1.1 2437
• AutoFact: pco112007; LOC100283156; K03100 signal peptidase I [EC:3.4.21.89] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene19947 SustainPine v1.1 1156
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene20068 SustainPine v1.1 1667
• AutoFact: ribose-5-phosphate isomerase, putative (EC:5.3.1.6); K01807 ribose 5-phosphate isomerase A [EC:5.3.1.6] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ribose-5-phosphate isomerase 0.0
Complete
sp_v1.1_unigene20278 SustainPine v1.1 1727
• AutoFact: peptidyl-prolyl cis-trans isomerase, putative 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: peptidyl-prolyl cis-trans isomerase 0.0
Complete
sp_v1.1_unigene20562 SustainPine v1.1 927
• AutoFact: Chloroplast PPF-1 n=1 Tax=Citrus trifoliata RepID=A7XUJ9_PONTR 2.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: inner membrane protein albino3 1.86701e-13
Putative N-terminus
sp_v1.1_unigene20699 SustainPine v1.1 235
• AutoFact: Os03g0452300 protein n=3 Tax=Oryza sativa RepID=Q850W6_ORYSJ 4.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 30s ribosomal protein s5 8.54782e-21
C-terminus
sp_v1.1_unigene21298 SustainPine v1.1 3842
• AutoFact: Rho GTPase activator, putative 0.0
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Blast2go: pleckstrin homology domain-containing 0.0
Putative Complete
sp_v1.1_unigene21523 SustainPine v1.1 1170
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_84.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TX43_VITVI 8.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: proline-rich family protein 0.0
Complete
sp_v1.1_unigene21554 SustainPine v1.1 428
• AutoFact: Putative ribulose-5-phosphate-3-epimerase n=2 Tax=Arabidopsis RepID=Q9SAU2_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ribulose-phosphate 3-epimerase 0.0
C-terminus
sp_v1.1_unigene21614 SustainPine v1.1 623
• AutoFact: immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family protein 2.8026e-45
• FL-Next: sp=Probable FKBP-type peptidyl-prolyl cis-trans isomerase 7, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene22168 SustainPine v1.1 1166
• AutoFact: PLSP1; PLSP1 (plastidic type I signal peptidase 1); peptidase; K03100 signal peptidase I [EC:3.4.21.89] 1.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 3.9954e-40
C-terminus
sp_v1.1_unigene22240 SustainPine v1.1 1166
• AutoFact: Chaperone protein dnaJ n=3 Tax=Chroococcales RepID=DNAJ_CYAA5 5.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: chaperone protein 0.0
Complete
sp_v1.1_unigene22631 SustainPine v1.1 1471
• AutoFact: Cold acclimation protein COR413-TM1 n=1 Tax=Cryptomeria japonica RepID=Q84LB5_CRYJA 1.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: cold acclimation protein cor413-tm1 0.0
Complete
sp_v1.1_unigene22744 SustainPine v1.1 908
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: unknown [Picea sitchensis] 0.0
Complete
sp_v1.1_unigene22918 SustainPine v1.1 2840
• AutoFact: dynamin, putative 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: at5g42080 mjc20_19 0.0
Complete
sp_v1.1_unigene23711 SustainPine v1.1 1210
• AutoFact: Photosystem I reaction center subunit XI, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9SMR5_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: probable photosystem i chain xi precursor 0.0
Complete
sp_v1.1_unigene23862 SustainPine v1.1 857
• AutoFact: Small molecular heat shock protein 10 n=1 Tax=Nelumbo nucifera RepID=A3FPF3_NELNU 2.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 5.7173e-43
Complete
sp_v1.1_unigene24322 SustainPine v1.1 521
• AutoFact: Small molecular heat shock protein 10 n=1 Tax=Nelumbo nucifera RepID=A3FPF3_NELNU 7.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 5.54755e-39
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain