Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: chloroplast stroma

Term: GO:0009570  Help

Source: GO from Blast2go

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene3134 SustainPine v1.1 1858
• AutoFact: Shikimate dehydrogenase n=3 Tax=Andropogoneae RepID=B6TSW1_MAIZE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dehydroquinate dehydratase shikimate dehydrogenase 0.0
Complete
sp_v1.1_unigene3136 SustainPine v1.1 3078
• AutoFact: Dipeptidyl-peptidase, putative n=1 Tax=Ricinus communis RepID=B9RNE4_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene3153 SustainPine v1.1 2287
• AutoFact: Alcohol dehydrogenase, putative n=1 Tax=Ricinus communis RepID=B9SHB0_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: quinone oxidoreductase-like protein at1g23740 0.0
Complete
sp_v1.1_unigene3173 SustainPine v1.1 612
• AutoFact: Alpha-glucan water dikinase 1, chloroplastic n=2 Tax=Arabidopsis RepID=GWD1_ARATH 0.0
• FL-Next: sp=Alpha-glucan water dikinase 1, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: alpha-glucan water chloroplast 0.0
Internal
sp_v1.1_unigene3316 SustainPine v1.1 1424
• AutoFact: Red chlorophyll catabolite reductase (Fragment) n=2 Tax=Pinaceae RepID=Q1ELT4_PINTA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: red chlorophyll catabolite reductase 0.0
Complete
sp_v1.1_unigene3480 SustainPine v1.1 2397
• AutoFact: alpha-amylase, putative (EC:3.2.1.60) 0.0
• FL-Next: sp=Alpha-amylase type A isozyme; Hordeum vulgare (Barley). 0.0
• Blast2go: plastid alpha-amylase 0.0
N-terminus
sp_v1.1_unigene3728 SustainPine v1.1 3460
• AutoFact: CLPC1; CLPC1; ATP binding / ATP-dependent peptidase/ ATPase; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: atp-dependent protease 0.0
Complete
sp_v1.1_unigene3739 SustainPine v1.1 2708
• AutoFact: Cell division protein ftsZ, putative n=1 Tax=Ricinus communis RepID=B9SRX2_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: plastid division protein 0.0
Complete
sp_v1.1_unigene3791 SustainPine v1.1 1281
• AutoFact: [S] COG0718 Uncharacterized protein conserved in bacteria 3.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene3792 SustainPine v1.1 738
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
• Blast2go: conserved hypothetical protein [Ricinus communis] 2.81264e-18
C-terminus
sp_v1.1_unigene3802 SustainPine v1.1 1068
• AutoFact: ThylakoidFormat domain containing protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: chloroplast-localized ptr -binding protein1 0.0
N-terminus
sp_v1.1_unigene3804 SustainPine v1.1 1288
• AutoFact: Peroxiredoxin, putative n=1 Tax=Ricinus communis RepID=B9SRG0_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene3806 SustainPine v1.1 1534
• AutoFact: Os07g0631900 protein n=2 Tax=Oryza sativa RepID=Q8LHN4_ORYSJ 1.99965e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna-binding protein cp33 0.0
C-terminus
sp_v1.1_unigene3836 SustainPine v1.1 1492
• AutoFact: Thioredoxin reductase n=1 Tax=Picea sitchensis RepID=B8LPW6_PICSI 0.0
• FL-Next: sp=Thioredoxin reductase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene3842 SustainPine v1.1 2224
• AutoFact: Coproporphyrinogen III oxidase, putative n=1 Tax=Ricinus communis RepID=B9RXC7_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: coproporphyrinogen iii oxidase 0.0
Complete
sp_v1.1_unigene3857 SustainPine v1.1 1148
• AutoFact: Putative carbamoyl phosphate synthase large subunit n=1 Tax=Nicotiana tabacum RepID=Q8L6J9_TOBAC 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: carbamoyl phosphate synthase large subunit 0.0
Internal
sp_v1.1_unigene3948 SustainPine v1.1 724
• AutoFact: 30S ribosomal protein S5, putative n=1 Tax=Ricinus communis RepID=B9RBC3_RICCO 1.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 30s ribosomal protein s5 1.205e-26
C-terminus
sp_v1.1_unigene4135 SustainPine v1.1 616
• AutoFact: WCRKC2; WCRKC2 (WCRKC THIOREDOXIN 2) 6.0e-40
• FL-Next: sp=Thioredoxin-like 3-2, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 3.18375e-42
Complete
sp_v1.1_unigene4190 SustainPine v1.1 1580
• AutoFact: ATP-dependent Clp protease proteolytic subunit n=1 Tax=Eriobotrya japonica RepID=D0EX73_9ROSA 0.0
• FL-Next: sp=ATP-dependent Clp protease proteolytic subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene4221 SustainPine v1.1 1633
• AutoFact: DUF1995 domain containing protein 3.0e-39
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain