Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: RNA binding

Source: Description from AutoFact


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene1916 SustainPine v1.1 1144
AutoFact: RNA binding 0.0
FL-Next: sp=CRS2-associated factor 2, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: crs2-associated factor 1 0.0
C-terminus
sp_v1.1_unigene2139 SustainPine v1.1 1004
AutoFact: RNA binding 2.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 4.21606e-38
C-terminus
sp_v1.1_unigene37220 SustainPine v1.1 760
AutoFact: RNA binding 4.06377e-44
FL-Next: sp=CRS2-associated factor 1, mitochondrial; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: crs2-associated factor 1 0.0
N-terminus
sp_v1.1_unigene38510 SustainPine v1.1 559
AutoFact: RNA binding 5.0e-37
FL-Next: sp=Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic; Zea mays (Maize). 0.0
Blast2go: rna binding 2.36399e-42
Internal
sp_v1.1_unigene46890 SustainPine v1.1 507
AutoFact: RNA binding 0.0
FL-Next: sp=Uncharacterized CRM domain-containing protein At3g25440, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
sp_v1.1_unigene65567 SustainPine v1.1 327
AutoFact: RNA binding 9.0e-07
FL-Next: sp=Uncharacterized CRM domain-containing protein At3g25440, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: hypothetical protein SORBIDRAFT_06g021160 [Sorghum bicolor] 4.1418e-15
Putative C-terminus
sp_v1.1_unigene68889 SustainPine v1.1 341
AutoFact: RNA binding 2.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 1.1842e-22
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain