Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: Copalyl diphosphate synthase n=2 Tax=Pinus RepID=TPSD1_PINTA

Source: Description from AutoFact


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene7582 SustainPine v1.1 2865
AutoFact: Copalyl diphosphate synthase n=2 Tax=Pinus RepID=TPSD1_PINTA 0.0
FL-Next: sp=Levopimaradiene synthase, chloroplastic; Pinus taeda (Loblolly pine). 0.0
Blast2go: e-alpha-bisabolene synthase 0.0
Complete
sp_v1.1_unigene17851 SustainPine v1.1 2889
AutoFact: Copalyl diphosphate synthase n=2 Tax=Pinus RepID=TPSD1_PINTA 0.0
FL-Next: sp=Levopimaradiene synthase, chloroplastic; Pinus taeda (Loblolly pine). 0.0
Blast2go: e-alpha-bisabolene synthase 0.0
Putative Complete
sp_v1.1_unigene18947 SustainPine v1.1 675
AutoFact: Copalyl diphosphate synthase n=2 Tax=Pinus RepID=TPSD1_PINTA 0.0
FL-Next: tr=Levopimaradiene/abietadiene synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e-alpha-bisabolene synthase 0.0
Internal
sp_v1.1_unigene28188 SustainPine v1.1 2032
AutoFact: Copalyl diphosphate synthase n=2 Tax=Pinus RepID=TPSD1_PINTA 0.0
FL-Next: sp=Levopimaradiene synthase, chloroplastic; Pinus taeda (Loblolly pine). 0.0
Blast2go: e-alpha-bisabolene synthase 0.0
C-terminus
sp_v1.1_unigene37062 SustainPine v1.1 777
AutoFact: Copalyl diphosphate synthase n=2 Tax=Pinus RepID=TPSD1_PINTA 0.0
FL-Next: sp=Levopimaradiene synthase, chloroplastic; Pinus taeda (Loblolly pine). 0.0
Blast2go: taxadiene synthase 0.0
N-terminus
sp_v1.1_unigene43648 SustainPine v1.1 608
AutoFact: Copalyl diphosphate synthase n=2 Tax=Pinus RepID=TPSD1_PINTA 0.0
FL-Next: sp=Levopimaradiene synthase, chloroplastic; Pinus taeda (Loblolly pine). 0.0
Blast2go: taxadiene synthase 0.0
N-terminus
sp_v1.1_unigene59512 SustainPine v1.1 1143
AutoFact: Copalyl diphosphate synthase n=2 Tax=Pinus RepID=TPSD1_PINTA 0.0
FL-Next: sp=Levopimaradiene synthase, chloroplastic; Pinus taeda (Loblolly pine). 0.0
Blast2go: e-alpha-bisabolene synthase 0.0
C-terminus
sp_v1.1_unigene60341 SustainPine v1.1 1522
AutoFact: Copalyl diphosphate synthase n=2 Tax=Pinus RepID=TPSD1_PINTA 0.0
FL-Next: sp=Levopimaradiene synthase, chloroplastic; Pinus taeda (Loblolly pine). 0.0
Blast2go: e-alpha-bisabolene synthase 0.0
C-terminus
sp_v1.1_unigene61361 SustainPine v1.1 554
AutoFact: Copalyl diphosphate synthase n=2 Tax=Pinus RepID=TPSD1_PINTA 0.0
FL-Next: tr=Putative abietadiene synthase; Pinus densiflora (Japanese red pine). 0.0
Blast2go: e-alpha-bisabolene synthase 0.0
Internal
sp_v1.1_unigene63978 SustainPine v1.1 501
AutoFact: Copalyl diphosphate synthase n=2 Tax=Pinus RepID=TPSD1_PINTA 5.0e-19
FL-Next: sp=Levopimaradiene synthase, chloroplastic; Pinus taeda (Loblolly pine). 0.0
Blast2go: terpene synthase 7.94357e-19
C-terminus
sp_v1.1_unigene67400 SustainPine v1.1 367
AutoFact: Copalyl diphosphate synthase n=2 Tax=Pinus RepID=TPSD1_PINTA 3.00004e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: terpene synthase 3.08944e-41
Putative C-terminus
sp_v1.1_unigene76619 SustainPine v1.1 400
AutoFact: Copalyl diphosphate synthase n=2 Tax=Pinus RepID=TPSD1_PINTA 9.0e-26
FL-Next: sp=Levopimaradiene synthase, chloroplastic; Pinus taeda (Loblolly pine). 0.0
Blast2go: terpene synthase 3.0878e-28
C-terminus
sp_v1.1_unigene79586 SustainPine v1.1 404
AutoFact: Copalyl diphosphate synthase n=2 Tax=Pinus RepID=TPSD1_PINTA 1.0e-27
FL-Next: sp=Levopimaradiene synthase, chloroplastic; Pinus taeda (Loblolly pine). 0.0
Blast2go: terpene synthase 2.77432e-27
C-terminus
sp_v1.1_unigene89783 SustainPine v1.1 624
AutoFact: Copalyl diphosphate synthase n=2 Tax=Pinus RepID=TPSD1_PINTA 0.0
FL-Next: sp=Levopimaradiene synthase, chloroplastic; Pinus taeda (Loblolly pine). 0.0
Blast2go: e-alpha-bisabolene synthase 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain