Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: LSU rRNA; Sequoiadendron giganteum

Source: Description from AutoFact


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene7541 SustainPine v1.1 177
AutoFact: LSU rRNA; Sequoiadendron giganteum 0.0
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Putative N-terminus
sp_v1.1_unigene25891 SustainPine v1.1 322
AutoFact: LSU rRNA; Sequoiadendron giganteum 0.0
FL-Next: tr=Senescence-associated protein; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: protein 5.9439e-38
Putative C-terminus
sp_v1.1_unigene26024 SustainPine v1.1 1714
AutoFact: LSU rRNA; Sequoiadendron giganteum 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: signal recognition particle 19 kda protein 0.0
Complete
sp_v1.1_unigene26705 SustainPine v1.1 973
AutoFact: LSU rRNA; Sequoiadendron giganteum 0.0
FL-Next: tr=Putative uncharacterized protein; Ectocarpus siliculosus (Brown alga). 0.0
Blast2go: rrna promoter binding protein 3.53157e-26
Complete
sp_v1.1_unigene28994 SustainPine v1.1 1560
AutoFact: LSU rRNA; Sequoiadendron giganteum 0.0
FL-Next: tr=Putative uncharacterized protein; Ectocarpus siliculosus (Brown alga). 0.0
Blast2go: 10 kda secreted protein 3.29165e-41
Complete
sp_v1.1_unigene29330 SustainPine v1.1 320
AutoFact: LSU rRNA; Sequoiadendron giganteum 0.0
FL-Next: tr=Senescence-associated protein; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: protein 0.0
N-terminus
sp_v1.1_unigene32716 SustainPine v1.1 113
AutoFact: LSU rRNA; Sequoiadendron giganteum 0.0
FL-Next: tr=Senescence-associated protein; Picea abies (Norway spruce) (Picea excelsa). 0.0
C-terminus
sp_v1.1_unigene35361 SustainPine v1.1 511
AutoFact: LSU rRNA; Sequoiadendron giganteum 0.0
Blast2go: senescence-associated protein 1.70669e-19
Putative coding
sp_v1.1_unigene56402 SustainPine v1.1 171
AutoFact: LSU rRNA; Sequoiadendron giganteum 1.0e-34
FL-Next: tr=Putative uncharacterized protein Sb0016s002650; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Internal
sp_v1.1_unigene57984 SustainPine v1.1 60
AutoFact: LSU rRNA; Sequoiadendron giganteum 4.0e-23
unknown
sp_v1.1_unigene90064 SustainPine v1.1 565
AutoFact: LSU rRNA; Sequoiadendron giganteum 0.0
FL-Next: tr=Putative uncharacterized protein; Ectocarpus siliculosus (Brown alga). 0.0
Blast2go: hypothetical protein SORBIDRAFT_0070s002020 [Sorghum bicolor] 1.37706e-24
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain