Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: Putative retrotransposon polyprotein n=1 Tax=Ipomoea batatas RepID=Q5MG92_IPOBA

Source: Description from AutoFact

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene42630 SustainPine v1.1 471
• AutoFact: Putative retrotransposon polyprotein n=1 Tax=Ipomoea batatas RepID=Q5MG92_IPOBA 2.0e-05
unknown
sp_v1.1_unigene42916 SustainPine v1.1 461
• AutoFact: Putative retrotransposon polyprotein n=1 Tax=Ipomoea batatas RepID=Q5MG92_IPOBA 3.0e-28
• FL-Next: tr=Putative uncharacterized protein; Asparagus officinalis (Garden asparagus). 0.0
• Blast2go: gag-pol polyprotein 2.14453e-32
Internal
sp_v1.1_unigene47172 SustainPine v1.1 344
• AutoFact: Putative retrotransposon polyprotein n=1 Tax=Ipomoea batatas RepID=Q5MG92_IPOBA 1.0e-14
• FL-Next: tr=Putative retrotransposon polyprotein; Ipomoea batatas (Sweet potato) (Convolvulus batatas). 0.0
• Blast2go: gag-pol identical 2.71164e-14
Internal
sp_v1.1_unigene51081 SustainPine v1.1 519
• AutoFact: Putative retrotransposon polyprotein n=1 Tax=Ipomoea batatas RepID=Q5MG92_IPOBA 2.0e-08
• FL-Next: tr=Putative retrotransposon polyprotein; Ipomoea batatas (Sweet potato) (Convolvulus batatas). 0.0
Internal
sp_v1.1_unigene52253 SustainPine v1.1 479
• AutoFact: Putative retrotransposon polyprotein n=1 Tax=Ipomoea batatas RepID=Q5MG92_IPOBA 2.0e-15
• FL-Next: tr=Retrotransposon protein, putative, Ty3-gypsy subclass; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: gag-pol polyprotein 1.07395e-15
Internal
sp_v1.1_unigene52413 SustainPine v1.1 389
• AutoFact: Putative retrotransposon polyprotein n=1 Tax=Ipomoea batatas RepID=Q5MG92_IPOBA 2.0e-22
• FL-Next: tr=Gag-pol polyprotein; Silene latifolia (White campion) (Bladder campion). 0.0
• Blast2go: gag-pol polyprotein 1.0711e-23
Internal
sp_v1.1_unigene66991 SustainPine v1.1 432
• AutoFact: Putative retrotransposon polyprotein n=1 Tax=Ipomoea batatas RepID=Q5MG92_IPOBA 2.0e-17
• FL-Next: tr=Putative uncharacterized protein; Asparagus officinalis (Garden asparagus). 0.0
• Blast2go: gag-pol polyprotein 8.50943e-24
Internal
sp_v1.1_unigene67603 SustainPine v1.1 408
• AutoFact: Putative retrotransposon polyprotein n=1 Tax=Ipomoea batatas RepID=Q5MG92_IPOBA 3.0e-05
Putative coding
sp_v1.1_unigene67743 SustainPine v1.1 388
• AutoFact: Putative retrotransposon polyprotein n=1 Tax=Ipomoea batatas RepID=Q5MG92_IPOBA 3.0e-16
• FL-Next: tr=Gag-pol polyprotein; Silene latifolia (White campion) (Bladder campion). 0.0
• Blast2go: gag-pol polyprotein 6.94769e-19
Internal
sp_v1.1_unigene71857 SustainPine v1.1 399
• AutoFact: Putative retrotransposon polyprotein n=1 Tax=Ipomoea batatas RepID=Q5MG92_IPOBA 4.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gag-pol identical 3.89492e-21
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain