Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: RNA recognition motif (RRM)-containing protein

Source: Description from AutoFact

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene2954 SustainPine v1.1 1741
• AutoFact: RNA recognition motif (RRM)-containing protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna recognition motif-containing protein 0.0
Complete
sp_v1.1_unigene4284 SustainPine v1.1 744
• AutoFact: RNA recognition motif (RRM)-containing protein 1.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna recognition motif-containing protein 1.62123e-29
Putative N-terminus
sp_v1.1_unigene4901 SustainPine v1.1 817
• AutoFact: RNA recognition motif (RRM)-containing protein 9.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 3.86516e-30
Putative N-terminus
sp_v1.1_unigene5018 SustainPine v1.1 3445
• AutoFact: RNA recognition motif (RRM)-containing protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene5329 SustainPine v1.1 830
• AutoFact: RNA recognition motif (RRM)-containing protein 5.0e-33
• FL-Next: sp=Zinc finger CCCH domain-containing protein 27; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: protein 5.73333e-37
Internal
sp_v1.1_unigene5481 SustainPine v1.1 548
• AutoFact: RNA recognition motif (RRM)-containing protein 3.0e-20
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: rna recognition motif family expressed 1.15348e-26
Internal
sp_v1.1_unigene6691 SustainPine v1.1 2178
• AutoFact: RNA recognition motif (RRM)-containing protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene14581 SustainPine v1.1 378
• AutoFact: RNA recognition motif (RRM)-containing protein 5.0e-20
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Blast2go: protein 2.3144e-26
Internal
sp_v1.1_unigene17726 SustainPine v1.1 825
• AutoFact: RNA recognition motif (RRM)-containing protein 2.0e-23
• FL-Next: sp=Glycine-rich RNA-binding protein 2, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: rna binding 0.0
Complete
sp_v1.1_unigene22676 SustainPine v1.1 900
• AutoFact: RNA recognition motif (RRM)-containing protein 2.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: unknown [Picea sitchensis] 2.72879e-14
C-terminus
sp_v1.1_unigene26986 SustainPine v1.1 1047
• AutoFact: RNA recognition motif (RRM)-containing protein 1.00053e-42
• FL-Next: tr=RNA recognition motif-containing protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
• Blast2go: rna recognition motif-containing protein 7.00649e-44
Internal
sp_v1.1_unigene29403 SustainPine v1.1 580
• AutoFact: RNA recognition motif (RRM)-containing protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
sp_v1.1_unigene29720 SustainPine v1.1 617
• AutoFact: RNA recognition motif (RRM)-containing protein 7.0e-27
• FL-Next: tr=Os02g0138200 protein; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: rna recognition motif -containing 1.26359e-30
N-terminus
sp_v1.1_unigene30497 SustainPine v1.1 361
• AutoFact: RNA recognition motif (RRM)-containing protein 4.0e-13
• FL-Next: sp=Zinc finger CCCH domain-containing protein 41; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 1.71027e-13
Internal
sp_v1.1_unigene30564 SustainPine v1.1 697
• AutoFact: RNA recognition motif (RRM)-containing protein 3.0e-37
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: rna recognition motif-containing protein 1.97429e-39
Internal
sp_v1.1_unigene33165 SustainPine v1.1 444
• AutoFact: RNA recognition motif (RRM)-containing protein 4.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: unknown [Picea sitchensis] 4.13574e-15
Putative N-terminus
sp_v1.1_unigene39242 SustainPine v1.1 553
• AutoFact: RNA recognition motif (RRM)-containing protein 2.0e-17
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: rna recognition motif -containing protein 2.25888e-21
Internal
sp_v1.1_unigene46039 SustainPine v1.1 226
• AutoFact: RNA recognition motif (RRM)-containing protein 7.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v1.1_unigene48562 SustainPine v1.1 442
• AutoFact: RNA recognition motif (RRM)-containing protein 1.0e-33
• FL-Next: tr=RNA recognition motif-containing protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
• Blast2go: squamous cell carcinoma antigen recognized by t-cells 3 1.05571e-34
Internal
sp_v1.1_unigene69738 SustainPine v1.1 360
• AutoFact: RNA recognition motif (RRM)-containing protein 8.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna recognition motif-containing protein 4.83424e-19
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain