Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: RNA helicase.

Term: EC:3.6.4.13  Help

Source: EC from AutoFact

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene20387 SustainPine v1.1 714
• AutoFact: ATP-dependent RNA helicase, putative; K12820 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:3.6.4.13] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative N-terminus
sp_v1.1_unigene26502 SustainPine v1.1 2163
• AutoFact: gpm624; LOC100273717; K12812 ATP-dependent RNA helicase UAP56/SUB2 [EC:3.6.4.13] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene27178 SustainPine v1.1 1441
• AutoFact: ATP-dependent RNA helicase, putative; K12815 pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 [EC:3.6.4.13] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene28535 SustainPine v1.1 1934
• AutoFact: ATP-dependent RNA helicase dhh1; K12614 ATP-dependent RNA helicase DDX6/DHH1 [EC:3.6.4.13] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene28731 SustainPine v1.1 2251
• AutoFact: ATP-dependent RNA helicase, putative; K12820 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:3.6.4.13] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative Complete
sp_v1.1_unigene31625 SustainPine v1.1 389
• AutoFact: dead box ATP-dependent RNA helicase, putative; K12812 ATP-dependent RNA helicase UAP56/SUB2 [EC:3.6.4.13] 3.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: hypothetical protein SELMODRAFT_146823 [Selaginella moellendorffii] 3.80272e-13
N-terminus
sp_v1.1_unigene33884 SustainPine v1.1 330
• AutoFact: pre-mRNA-splicing factor ATP-dependent RNA helicase; K12820 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:3.6.4.13] 9.0e-09
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v1.1_unigene34392 SustainPine v1.1 409
• AutoFact: pre-mRNA-splicing factor ATP-dependent RNA helicase; K12820 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:3.6.4.13] 4.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 7.90942e-35
Internal
sp_v1.1_unigene38531 SustainPine v1.1 421
• AutoFact: dead box ATP-dependent RNA helicase, putative; K12811 ATP-dependent RNA helicase DDX46/PRP5 [EC:3.6.4.13] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna helicase 0.0
Internal
sp_v1.1_unigene44691 SustainPine v1.1 346
• AutoFact: helicase, putative; K12598 ATP-dependent RNA helicase DOB1 [EC:3.6.4.13] 2.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: hua enhancer 2 6.20533e-36
Internal
sp_v1.1_unigene45179 SustainPine v1.1 330
• AutoFact: DEAD/DEAH box helicase, putative; K12835 ATP-dependent RNA helicase DDX42 [EC:3.6.4.13] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
sp_v1.1_unigene58186 SustainPine v1.1 1041
• AutoFact: DEAD-box protein abstrakt, putative; K13116 ATP-dependent RNA helicase DDX41 [EC:3.6.4.13] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead-box protein abstrakt 0.0
N-terminus
sp_v1.1_unigene59141 SustainPine v1.1 924
• AutoFact: dead box ATP-dependent RNA helicase, putative; K12823 ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13] 2.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead box atp-dependent rna 8.89705e-32
C-terminus
sp_v1.1_unigene60616 SustainPine v1.1 844
• AutoFact: dead box ATP-dependent RNA helicase, putative; K12823 ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13] 2.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead box atp-dependent rna 1.08596e-26
Putative C-terminus
sp_v1.1_unigene62347 SustainPine v1.1 604
• AutoFact: dead box ATP-dependent RNA helicase, putative; K12823 ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead box rna helicase 0.0
Internal
sp_v1.1_unigene63506 SustainPine v1.1 580
• AutoFact: ATP-dependent RNA helicase, putative; K12820 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:3.6.4.13] 3.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 5.37627e-38
Putative N-terminus
sp_v1.1_unigene63646 SustainPine v1.1 386
• AutoFact: DEAD box RNA helicase, putative; K11594 ATP-dependent RNA helicase [EC:3.6.4.13] 5.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead box rna 1.23742e-19
Putative C-terminus
sp_v1.1_unigene76551 SustainPine v1.1 456
• AutoFact: gpm624; LOC100273717; K12812 ATP-dependent RNA helicase UAP56/SUB2 [EC:3.6.4.13] 9.99967e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead box atp-dependent rna 6.71923e-42
C-terminus
sp_v1.1_unigene90868 SustainPine v1.1 476
• AutoFact: GF21236 gene product from transcript GF21236-RA ; K12811 ATP-dependent RNA helicase DDX46/PRP5 [EC:3.6.4.13] 2.0e-06
• FL-Next: sp=Uncharacterized GPI-anchored protein At5g19250; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain