Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: RNA binding protein, putative

Source: Description from AutoFact


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene65 SustainPine v1.1 1546
AutoFact: RNA binding protein, putative 0.0
FL-Next: sp=Pumilio homolog 12; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene957 SustainPine v1.1 1331
AutoFact: RNA binding protein, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene3920 SustainPine v1.1 782
AutoFact: RNA binding protein, putative 3.0e-28
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: rna binding 2.30827e-29
C-terminus
sp_v1.1_unigene4982 SustainPine v1.1 2507
AutoFact: RNA binding protein, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding 0.0
Complete
sp_v1.1_unigene14406 SustainPine v1.1 868
AutoFact: RNA binding protein, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding 0.0
Internal
sp_v1.1_unigene16021 SustainPine v1.1 1116
AutoFact: RNA binding protein, putative 6.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding 0.0
Complete
sp_v1.1_unigene16818 SustainPine v1.1 761
AutoFact: RNA binding protein, putative 6.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding 0.0
Complete
sp_v1.1_unigene23146 SustainPine v1.1 1906
AutoFact: RNA binding protein, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene27415 SustainPine v1.1 1905
AutoFact: RNA binding protein, putative 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene28604 SustainPine v1.1 1186
AutoFact: RNA binding protein, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleic acid binding nucleotide binding 0.0
C-terminus
sp_v1.1_unigene28968 SustainPine v1.1 1571
AutoFact: RNA binding protein, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleic acid binding nucleotide binding 0.0
C-terminus
sp_v1.1_unigene30683 SustainPine v1.1 797
AutoFact: RNA binding protein, putative 3.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 3.05345e-24
C-terminus
sp_v1.1_unigene32149 SustainPine v1.1 1955
AutoFact: RNA binding protein, putative 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene32656 SustainPine v1.1 673
AutoFact: RNA binding protein, putative 3.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
sp_v1.1_unigene32687 SustainPine v1.1 1168
AutoFact: RNA binding protein, putative 1.00053e-42
FL-Next: sp=Pumilio homolog 12; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene36815 SustainPine v1.1 432
AutoFact: RNA binding protein, putative 2.0e-38
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: rna binding 1.18126e-38
C-terminus
sp_v1.1_unigene38398 SustainPine v1.1 751
AutoFact: RNA binding protein, putative 2.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative N-terminus
sp_v1.1_unigene40599 SustainPine v1.1 554
AutoFact: RNA binding protein, putative 1.0e-13
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: rna binding 3.26186e-15
Putative C-terminus
sp_v1.1_unigene51276 SustainPine v1.1 537
AutoFact: RNA binding protein, putative 5.0e-18
FL-Next: sp=Pumilio homolog 12; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 8.70044e-19
Internal
sp_v1.1_unigene57890 SustainPine v1.1 370
AutoFact: RNA binding protein, putative 4.0e-36
FL-Next: sp=Pumilio homolog 12; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 2.2769e-37
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain