Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: sp=5'-3' exoribonuclease 3; Arabidopsis thaliana (Mouse-ear cress).

Source: Description from FL-Next


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene1164 SustainPine v1.1 1075
AutoFact: 5'->3' exoribonuclease, putative; K12619 5'-3' exoribonuclease 2 [EC:3.1.13.-] 0.0
FL-Next: sp=5'-3' exoribonuclease 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: 5 - 0.0
Internal
sp_v1.1_unigene8684 SustainPine v1.1 771
AutoFact: XRN3; XRN3; 5'-3' exoribonuclease; K12619 5'-3' exoribonuclease 2 [EC:3.1.13.-] 0.0
FL-Next: sp=5'-3' exoribonuclease 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: 5 -3 exoribonuclease 2 0.0
N-terminus
sp_v1.1_unigene27676 SustainPine v1.1 1289
AutoFact: Os01g0872700 protein n=3 Tax=Oryza sativa RepID=Q5N739_ORYSJ 5.0e-39
FL-Next: sp=5'-3' exoribonuclease 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: 5 - 2.50333e-39
C-terminus
sp_v1.1_unigene29152 SustainPine v1.1 2112
AutoFact: Os01g0872700 protein n=3 Tax=Oryza sativa RepID=Q5N739_ORYSJ 0.0
FL-Next: sp=5'-3' exoribonuclease 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene29722 SustainPine v1.1 647
AutoFact: Os01g0872700 protein n=3 Tax=Oryza sativa RepID=Q5N739_ORYSJ 5.0e-22
FL-Next: sp=5'-3' exoribonuclease 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: 5 - 5.20019e-22
Internal
sp_v1.1_unigene37671 SustainPine v1.1 1117
AutoFact: 5'->3' exoribonuclease, putative; K12619 5'-3' exoribonuclease 2 [EC:3.1.13.-] 0.0
FL-Next: sp=5'-3' exoribonuclease 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: 5 -3 exoribonuclease 2 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain