Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: sp=RNA polymerase II C-terminal domain phosphatase-like 1; Arabidopsis thaliana (Mouse-ear cress).

Source: Description from FL-Next


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene2364 SustainPine v1.1 917
AutoFact: double-stranded RNA binding protein, putative 4.2039e-45
FL-Next: sp=RNA polymerase II C-terminal domain phosphatase-like 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
sp_v1.1_unigene10486 SustainPine v1.1 1164
AutoFact: Double-stranded RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RZ63_RICCO 5.0e-22
FL-Next: sp=RNA polymerase II C-terminal domain phosphatase-like 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: double-stranded rna binding 9.062e-22
C-terminus
sp_v1.1_unigene10503 SustainPine v1.1 1176
AutoFact: double-stranded RNA binding protein, putative 0.0
FL-Next: sp=RNA polymerase II C-terminal domain phosphatase-like 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: double-stranded rna binding 0.0
N-terminus
sp_v1.1_unigene29160 SustainPine v1.1 625
AutoFact: CPL1; CPL1 (C-TERMINAL DOMAIN PHOSPHATASE-LIKE 1); double-stranded RNA binding / nucleotide phosphatase 1.0e-06
FL-Next: sp=RNA polymerase II C-terminal domain phosphatase-like 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v1.1_unigene35306 SustainPine v1.1 882
AutoFact: Double-stranded RNA-binding domain (DsRBD)-containing protein-like n=2 Tax=Oryza sativa RepID=Q6H5U8_ORYSJ 6.0e-29
FL-Next: sp=RNA polymerase II C-terminal domain phosphatase-like 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: double-stranded rna-binding domain -containing 3.64972e-32
Putative C-terminus
sp_v1.1_unigene37512 SustainPine v1.1 458
AutoFact: double-stranded RNA binding protein, putative 9.0e-23
FL-Next: sp=RNA polymerase II C-terminal domain phosphatase-like 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 2.46169e-28
Internal
sp_v1.1_unigene39999 SustainPine v1.1 232
AutoFact: double-stranded RNA binding protein, putative 1.0e-12
FL-Next: sp=RNA polymerase II C-terminal domain phosphatase-like 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: double-stranded rna binding 9.21254e-15
Internal
sp_v1.1_unigene46544 SustainPine v1.1 495
AutoFact: Double-stranded RNA-binding domain (DsRBD)-containing protein-like n=2 Tax=Oryza sativa RepID=Q6H5U8_ORYSJ 2.0e-22
FL-Next: sp=RNA polymerase II C-terminal domain phosphatase-like 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: c-terminal domain phosphatase-like protein 4.21887e-28
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain