Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).

Source: Description from FL-Next


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene65799 SustainPine v1.1 459
AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 2.0e-35
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: gag-pol polyprotein 2.92905e-35
C-terminus
sp_v1.1_unigene67526 SustainPine v1.1 264
AutoFact: Retroelement pol polyprotein-like n=1 Tax=Arabidopsis thaliana RepID=Q9LJ55_ARATH 6.0e-13
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: retroelement pol poly 5.08571e-13
Internal
sp_v1.1_unigene67567 SustainPine v1.1 465
AutoFact: Gag-Pol n=1 Tax=Ipomoea batatas RepID=Q6BCY1_IPOBA 3.0e-05
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Internal
sp_v1.1_unigene67955 SustainPine v1.1 356
AutoFact: Putaive copia-like retrotransposon polyprotein, 5'-partial (Fragment) n=1 Tax=Oryza sativa RepID=Q8W5D1_ORYSA 2.0e-10
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Internal
sp_v1.1_unigene68641 SustainPine v1.1 323
AutoFact: Unassigned protein
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: retrotransposon unclassified 5.76381e-18
Internal
sp_v1.1_unigene68904 SustainPine v1.1 475
AutoFact: Integrase n=1 Tax=Cucumis melo RepID=A6YTD9_CUCME 5.0e-30
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: copia-type polyprotein 3.27184e-30
Putative C-terminus
sp_v1.1_unigene69350 SustainPine v1.1 356
AutoFact: Unassigned protein
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: retrotransposon unclassified 1.51771e-25
Putative C-terminus
sp_v1.1_unigene70019 SustainPine v1.1 313
AutoFact: Unassigned protein
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: copia-type polyprotein 3.74419e-16
Internal
sp_v1.1_unigene71039 SustainPine v1.1 149
AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 4.0e-08
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Internal
sp_v1.1_unigene72331 SustainPine v1.1 322
AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 1.0e-31
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: gag-pol polyprotein 2.38693e-31
Internal
sp_v1.1_unigene72792 SustainPine v1.1 441
AutoFact: Unassigned protein
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: hypothetical protein VITISV_036909 [Vitis vinifera] 1.89812e-34
Internal
sp_v1.1_unigene72891 SustainPine v1.1 364
AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 2.0e-24
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: gag-pol polyprotein 2.97456e-24
Internal
sp_v1.1_unigene72957 SustainPine v1.1 424
AutoFact: Unassigned protein
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: retrotransposon ty1-copia subclass 1.05981e-18
Internal
sp_v1.1_unigene73063 SustainPine v1.1 404
AutoFact: Reverse transcriptase (Fragment) n=2 Tax=Spermatophyta RepID=P93687_SECCE 5.0e-20
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: reverse transcriptase 9.47422e-20
Internal
sp_v1.1_unigene73448 SustainPine v1.1 298
AutoFact: Gag-pol polyprotein, putative n=1 Tax=Solanum demissum RepID=Q6L3Y5_SOLDE 4.0e-11
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: Gag-pol polyprotein, putative [Solanum demissum] 8.09564e-11
Internal
sp_v1.1_unigene73506 SustainPine v1.1 405
AutoFact: Gag-pol polyprotein n=1 Tax=Populus deltoides RepID=Q710T7_POPDE 6.0e-14
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: gag-pol polyprotein 1.20524e-13
Putative N-terminus
sp_v1.1_unigene73971 SustainPine v1.1 358
AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=1 Tax=Oryza sativa Japonica Group RepID=Q2QP36_ORYSJ 1.0e-24
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: retrotransposon ty1-copia subclass 2.18308e-24
Internal
sp_v1.1_unigene74151 SustainPine v1.1 264
AutoFact: Unassigned protein 4.0e-13
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: hypothetical protein VITISV_032634 [Vitis vinifera] 4.49899e-13
Internal
sp_v1.1_unigene74948 SustainPine v1.1 357
AutoFact: Unassigned protein 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: disease resistance protein 0.0
C-terminus
sp_v1.1_unigene75518 SustainPine v1.1 366
AutoFact: Copia-type polyprotein, putative n=3 Tax=Arabidopsis thaliana RepID=Q9C739_ARATH 9.0e-11
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: hypothetical protein VITISV_043230 [Vitis vinifera] 1.71579e-11
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain