Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress).

Source: Description from FL-Next

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene1176 SustainPine v1.1 1561
• AutoFact: ATP-dependent RNA helicase, putative; K12820 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:3.6.4.13] 0.0
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 0.0
Putative N-terminus
sp_v1.1_unigene1428 SustainPine v1.1 2508
• AutoFact: ATP-dependent RNA helicase, putative; K12820 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:3.6.4.13] 0.0
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene1817 SustainPine v1.1 670
• AutoFact: similar to EMB2733/ESP3 (EMBRYO DEFECTIVE 2733); ATP-dependent RNA helicase; K12813 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:3.6.4.13] 1.0e-16
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: rna helicase 9.19988e-20
C-terminus
sp_v1.1_unigene6762 SustainPine v1.1 753
• AutoFact: ATP-dependent RNA helicase, putative; K12815 pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 [EC:3.6.4.13] 0.0
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 0.0
Internal
sp_v1.1_unigene10677 SustainPine v1.1 1108
• AutoFact: ATP-dependent RNA helicase, putative; K12818 ATP-dependent RNA helicase DHX8/PRP22 [EC:3.6.4.13] 1.0e-31
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: atp-dependent rna 4.61147e-36
N-terminus
sp_v1.1_unigene13093 SustainPine v1.1 866
• AutoFact: Putative RNA helicase A (Fragment) n=1 Tax=Arabidopsis thaliana RepID=Q9ZU53_ARATH 0.0
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: deah (asp-glu-ala-his) box polypeptide 36 0.0
Internal
sp_v1.1_unigene30047 SustainPine v1.1 1285
• AutoFact: PREDICTED: similar to EMB2733/ESP3 (EMBRYO DEFECTIVE 2733); ATP-dependent RNA helicase n=1 Tax=Vitis vinifera RepID=UPI00019851EB 0.0
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dead deah box helicase 0.0
Internal
sp_v1.1_unigene30721 SustainPine v1.1 374
• AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9R8Y0_RICCO 4.00001e-40
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: rna helicase 3.97689e-42
Internal
sp_v1.1_unigene31298 SustainPine v1.1 722
• AutoFact: PREDICTED: similar to helicase domain-containing protein n=1 Tax=Vitis vinifera RepID=UPI0001983869 0.0
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: helicase domain-containing protein 0.0
Internal
sp_v1.1_unigene33884 SustainPine v1.1 330
• AutoFact: pre-mRNA-splicing factor ATP-dependent RNA helicase; K12820 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:3.6.4.13] 9.0e-09
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v1.1_unigene40986 SustainPine v1.1 392
• AutoFact: Pre-mRNA splicing factor ATP-dependent RNA helicase-like protein n=2 Tax=Arabidopsis RepID=Q9LXT8_ARATH 0.0
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 0.0
Internal
sp_v1.1_unigene48965 SustainPine v1.1 425
• AutoFact: Probable pre-mRNA-splicing factor ATP-dependent RNA helicase n=1 Tax=Arabidopsis thaliana RepID=DHX8_ARATH 0.0
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 0.0
Internal
sp_v1.1_unigene50157 SustainPine v1.1 340
• AutoFact: Helicase domain-containing protein n=4 Tax=Arabidopsis RepID=D7KD38_ARALY 0.0
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: helicase domain-containing protein 0.0
Internal
sp_v1.1_unigene53533 SustainPine v1.1 466
• AutoFact: ATP-dependent RNA helicase, putative 0.0
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: helicase domain-containing protein 0.0
Internal
sp_v1.1_unigene54730 SustainPine v1.1 444
• AutoFact: ATP-dependent RNA helicase, putative 0.0
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: helicase domain-containing protein 0.0
Internal
sp_v1.1_unigene58190 SustainPine v1.1 1329
• AutoFact: ATP-dependent RNA helicase DHX8 n=3 Tax=Poaceae RepID=B6SV02_MAIZE 0.0
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: deah (asp-glu-ala-his) box polypeptide 33 0.0
Internal
sp_v1.1_unigene61586 SustainPine v1.1 323
• AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9RMI9_RICCO 6.0e-39
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: atp-dependent rna 1.06894e-38
Internal
sp_v1.1_unigene62061 SustainPine v1.1 269
• AutoFact: Fructose-bisphosphate aldolase n=1 Tax=Oryza sativa Japonica Group RepID=B9EZ83_ORYSJ 2.0e-37
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: helicase domain-containing protein 3.85217e-37
Internal
sp_v1.1_unigene68835 SustainPine v1.1 430
• AutoFact: ATP-dependent RNA helicase, putative n=2 Tax=Arabidopsis thaliana RepID=Q9C7G2_ARATH 0.0
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: atp-dependent rna 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain