Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: sp=CHD3-type chromatin-remodeling factor PICKLE; Arabidopsis thaliana (Mouse-ear cress).

Source: Description from FL-Next


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene1417 SustainPine v1.1 2243
AutoFact: chromodomain helicase DNA binding protein, putative (EC:2.7.11.1); K11643 chromodomain-helicase-DNA-binding protein 4 [EC:3.6.1.-] 0.0
FL-Next: sp=CHD3-type chromatin-remodeling factor PICKLE; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: chromatin remodeling complex subunit 0.0
C-terminus
sp_v1.1_unigene8073 SustainPine v1.1 650
AutoFact: CHR907; chromatin remodeling complex subunit; K11367 chromodomain-helicase-DNA-binding protein 1 [EC:3.6.1.-] 0.0
FL-Next: sp=CHD3-type chromatin-remodeling factor PICKLE; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: chromodomain-helicase-dna-binding protein 0.0
Internal
sp_v1.1_unigene19814 SustainPine v1.1 176
AutoFact: Chromodomain helicase DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RNX6_RICCO 5.0e-18
FL-Next: sp=CHD3-type chromatin-remodeling factor PICKLE; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: chromatin remodeling complex subunit 8.71389e-18
Internal
sp_v1.1_unigene32174 SustainPine v1.1 420
AutoFact: CHR1512; SNF2 family DNA-dependent ATPase; K11643 chromodomain-helicase-DNA-binding protein 4 [EC:3.6.1.-] 6.0e-13
FL-Next: sp=CHD3-type chromatin-remodeling factor PICKLE; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: snf2 family dna-dependent atpase 1.47444e-12
Putative N-terminus
sp_v1.1_unigene32331 SustainPine v1.1 519
AutoFact: CHR911; chromatin remodeling complex subunit; K11643 chromodomain-helicase-DNA-binding protein 4 [EC:3.6.1.-] 0.0
FL-Next: sp=CHD3-type chromatin-remodeling factor PICKLE; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: chromatin remodeling complex subunit 0.0
Internal
sp_v1.1_unigene35247 SustainPine v1.1 364
AutoFact: Chromodomain helicase DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RNX6_RICCO 3.0e-37
FL-Next: sp=CHD3-type chromatin-remodeling factor PICKLE; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: chromatin remodeling complex subunit 4.92229e-37
Internal
sp_v1.1_unigene39908 SustainPine v1.1 361
AutoFact: SNF2 family DNA-dependent ATPase (Fragment) n=2 Tax=Physcomitrella patens subsp. patens RepID=A9TI22_PHYPA 5.0e-34
FL-Next: sp=CHD3-type chromatin-remodeling factor PICKLE; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: snf2 family dna-dependent atpase 9.01084e-34
Internal
sp_v1.1_unigene40811 SustainPine v1.1 374
AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9GVF7_POPTR 2.0e-28
FL-Next: sp=CHD3-type chromatin-remodeling factor PICKLE; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: chromatin remodeling complex subunit 3.28249e-28
Internal
sp_v1.1_unigene45620 SustainPine v1.1 587
AutoFact: chromodomain helicase DNA binding protein, putative (EC:2.7.11.1); K11643 chromodomain-helicase-DNA-binding protein 4 [EC:3.6.1.-] 0.0
FL-Next: sp=CHD3-type chromatin-remodeling factor PICKLE; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: snf2 family dna-dependent atpase 0.0
Internal
sp_v1.1_unigene45755 SustainPine v1.1 184
AutoFact: CHD3-type chromatin-remodeling factor PICKLE n=2 Tax=Arabidopsis RepID=PKL_ARATH 1.0e-24
FL-Next: sp=CHD3-type chromatin-remodeling factor PICKLE; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: snf2 family dna-dependent atpase 2.22222e-24
Internal
sp_v1.1_unigene62131 SustainPine v1.1 205
AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9H8P5_POPTR 2.0e-23
FL-Next: sp=CHD3-type chromatin-remodeling factor PICKLE; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna repair and recombination protein 3.15259e-23
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain