Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: sp=DNA mismatch repair protein Msh6-1; Arabidopsis thaliana (Mouse-ear cress).

Source: Description from FL-Next


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene4708 SustainPine v1.1 1490
AutoFact: ATP binding protein, putative; K08737 DNA mismatch repair protein MSH6 8.0e-11
FL-Next: sp=DNA mismatch repair protein Msh6-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 7.05249e-12
N-terminus
sp_v1.1_unigene9455 SustainPine v1.1 974
AutoFact: DNA mismatch repair protein n=1 Tax=Petunia x hybrida RepID=Q6DQL6_PETHY 7.0e-18
FL-Next: sp=DNA mismatch repair protein Msh6-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 1.34154e-17
Internal
sp_v1.1_unigene22297 SustainPine v1.1 316
AutoFact: Androgen induced inhibitor of proliferation (As3) / pds5, putative n=1 Tax=Ricinus communis RepID=B9T579_RICCO 7.0e-17
FL-Next: sp=DNA mismatch repair protein Msh6-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: sister chromatid cohesion protein pds5 1.29426e-16
Internal
sp_v1.1_unigene35558 SustainPine v1.1 587
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9RVP2_RICCO 1.0e-24
FL-Next: sp=DNA mismatch repair protein Msh6-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 3.22887e-30
Internal
sp_v1.1_unigene37370 SustainPine v1.1 958
AutoFact: Unassigned protein
FL-Next: sp=DNA mismatch repair protein Msh6-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 3.81928e-17
Internal
sp_v1.1_unigene40403 SustainPine v1.1 148
AutoFact: Os04g0501600 protein n=4 Tax=Oryza sativa RepID=Q0JBZ3_ORYSJ 1.0e-09
FL-Next: sp=DNA mismatch repair protein Msh6-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v1.1_unigene41126 SustainPine v1.1 491
AutoFact: SNF2 family DNA-dependent ATPase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TJL1_PHYPA 5.0e-09
FL-Next: sp=DNA mismatch repair protein Msh6-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v1.1_unigene42039 SustainPine v1.1 426
AutoFact: MSH6; MSH6 (MUTS HOMOLOG 6); damaged DNA binding; K08737 DNA mismatch repair protein MSH6 3.9937e-43
FL-Next: sp=DNA mismatch repair protein Msh6-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 5.46506e-44
Internal
sp_v1.1_unigene42853 SustainPine v1.1 400
AutoFact: ATP binding protein, putative; K08737 DNA mismatch repair protein MSH6 1.0e-35
FL-Next: sp=DNA mismatch repair protein Msh6-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: atp binding 7.76999e-38
Internal
sp_v1.1_unigene43003 SustainPine v1.1 430
AutoFact: Androgen induced inhibitor of proliferation (As3) / pds5, putative n=1 Tax=Ricinus communis RepID=B9T579_RICCO 3.0e-19
FL-Next: sp=DNA mismatch repair protein Msh6-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: sister chromatid cohesion protein pds5 6.12789e-19
Internal
sp_v1.1_unigene73932 SustainPine v1.1 429
AutoFact: Unassigned protein
FL-Next: sp=DNA mismatch repair protein Msh6-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain