Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress).

Source: Description from FL-Next

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene2462 SustainPine v1.1 968
• AutoFact: DNA-directed RNA polymerase n=1 Tax=Selaginella moellendorffii RepID=D8SDS6_SELML 0.0
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dna-directed rna polymerase i largest 0.0
Internal
sp_v1.1_unigene11735 SustainPine v1.1 682
• AutoFact: DNA-directed RNA polymerase n=2 Tax=rosids RepID=B9SXC0_RICCO 0.0
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dna-directed rna polymerase ii largest 0.0
N-terminus
sp_v1.1_unigene14893 SustainPine v1.1 1820
• AutoFact: Proteophosphoglycan 5 n=1 Tax=Leishmania major RepID=Q4FX62_LEIMA 4.0e-15
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative C-terminus
sp_v1.1_unigene21475 SustainPine v1.1 398
• AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Vitis vinifera RepID=E0CQW1_VITVI 0.0
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: rna polymerase ii largest subunit 0.0
Internal
sp_v1.1_unigene21881 SustainPine v1.1 675
• AutoFact: DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group RepID=B9FZ51_ORYSJ 2.0e-28
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dna-directed rna polymerase 1.31686e-29
Internal
sp_v1.1_unigene24351 SustainPine v1.1 1563
• AutoFact: flocculin 2.0e-13
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: proteophosphoglycan ppg4 8.05068e-14
C-terminus
sp_v1.1_unigene25930 SustainPine v1.1 1537
• AutoFact: DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group RepID=B9FZ51_ORYSJ 1.00053e-42
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dna-directed rna polymerase 7.28675e-44
C-terminus
sp_v1.1_unigene27650 SustainPine v1.1 385
• AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Pinus nigra RepID=Q2TUM9_9CONI 0.0
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: rna polymerase iii large subunit 0.0
Internal
sp_v1.1_unigene28102 SustainPine v1.1 1866
• AutoFact: DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group RepID=B9FZ51_ORYSJ 0.0
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: nrpb1 (rna polymerase ii large subunit) dna binding dna-directed rna polymerase 0.0
Internal
sp_v1.1_unigene36121 SustainPine v1.1 807
• AutoFact: DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RSV5_PHYPA 0.0
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 0.0
Internal
sp_v1.1_unigene38631 SustainPine v1.1 558
• AutoFact: DNA-directed RNA polymerase n=1 Tax=Ricinus communis RepID=B9SL65_RICCO 2.0e-36
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: rna polymerase a large subunit 3.47228e-36
Internal
sp_v1.1_unigene38645 SustainPine v1.1 825
• AutoFact: DNA-directed RNA polymerase n=1 Tax=Ricinus communis RepID=B9SL65_RICCO 0.0
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dna-directed rna polymerase i largest 0.0
Internal
sp_v1.1_unigene48113 SustainPine v1.1 486
• AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Podocarpus macrophyllus RepID=Q2TUP9_9CONI 0.0
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: rna polymerase i largest subunit 0.0
Internal
sp_v1.1_unigene48890 SustainPine v1.1 383
• AutoFact: DNA-directed RNA polymerase n=1 Tax=Schizophyllum commune H4-8 RepID=D8PLU0_SCHCO 1.0e-25
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: rna polymerase ii large subunit 1.96777e-25
Internal
sp_v1.1_unigene50611 SustainPine v1.1 382
• AutoFact: DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RSV5_PHYPA 1.99993e-41
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 3.10051e-41
Putative N-terminus
sp_v1.1_unigene55506 SustainPine v1.1 335
• AutoFact: DNA-directed RNA polymerase n=2 Tax=rosids RepID=B9SXC0_RICCO 3.0e-24
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dna-directed rna polymerase 4.94261e-24
Internal
sp_v1.1_unigene55739 SustainPine v1.1 444
• AutoFact: DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RSV5_PHYPA 0.0
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 0.0
Internal
sp_v1.1_unigene79542 SustainPine v1.1 607
• AutoFact: DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group RepID=B9FZ51_ORYSJ 1.0e-29
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dna-directed rna polymerase 3.21083e-31
Internal
sp_v1.1_unigene86225 SustainPine v1.1 261
• AutoFact: DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group RepID=B9FZ51_ORYSJ 2.0e-23
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dna-directed rna polymerase 6.89989e-26
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain