Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: RNA-directed DNA polymerase (Reverse transcriptase); Zinc finger, CCHC-type; Peptidase aspartic, active site; Retrotransposon gag protein n=1 Tax=Medicago truncatula RepID=Q2HW87_MEDTR

Source: Description from AutoFact


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene19296 SustainPine v3.0 247
AutoFact: RNA-directed DNA polymerase (Reverse transcriptase); Zinc finger, CCHC-type; Peptidase aspartic, active site; Retrotransposon gag protein n=1 Tax=Medicago truncatula RepID=Q2HW87_MEDTR 3.0e-07
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene65249 SustainPine v3.0 126
AutoFact: RNA-directed DNA polymerase (Reverse transcriptase); Zinc finger, CCHC-type; Peptidase aspartic, active site; Retrotransposon gag protein n=1 Tax=Medicago truncatula RepID=Q2HW87_MEDTR 7.0e-05
FL-Next: tr=RNA-directed DNA polymerase (Reverse transcriptase); Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Internal
sp_v3.0_unigene69025 SustainPine v3.0 314
AutoFact: RNA-directed DNA polymerase (Reverse transcriptase); Zinc finger, CCHC-type; Peptidase aspartic, active site; Retrotransposon gag protein n=1 Tax=Medicago truncatula RepID=Q2HW87_MEDTR 3.0e-20
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 5.26e-31
Putative N-terminus
sp_v3.0_unigene71107 SustainPine v3.0 328
AutoFact: RNA-directed DNA polymerase (Reverse transcriptase); Zinc finger, CCHC-type; Peptidase aspartic, active site; Retrotransposon gag protein n=1 Tax=Medicago truncatula RepID=Q2HW87_MEDTR 7.0e-05
FL-Next: tr=Gag polyprotein-related; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain