Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: PREDICTED: similar to copia-like retrotransposable element n=1 Tax=Nasonia vitripennis RepID=UPI00015B472C

Source: Description from AutoFact

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene56617 SustainPine v3.0 228
• AutoFact: PREDICTED: similar to copia-like retrotransposable element n=1 Tax=Nasonia vitripennis RepID=UPI00015B472C 1.0e-05
• FL-Next: tr=Uncharacterized protein; Brachypodium distachyon (Purple false brome) (Trachynia distachya). 0.0
Internal
sp_v3.0_unigene56995 SustainPine v3.0 256
• AutoFact: PREDICTED: similar to copia-like retrotransposable element n=1 Tax=Nasonia vitripennis RepID=UPI00015B472C 7.0e-08
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene71284 SustainPine v3.0 336
• AutoFact: PREDICTED: similar to copia-like retrotransposable element n=1 Tax=Nasonia vitripennis RepID=UPI00015B472C 2.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene83064 SustainPine v3.0 310
• AutoFact: PREDICTED: similar to copia-like retrotransposable element n=1 Tax=Nasonia vitripennis RepID=UPI00015B472C 0.0001
• FL-Next: tr=Uncharacterized protein; Brachypodium distachyon (Purple false brome) (Trachynia distachya). 0.0
Internal
sp_v3.0_unigene103047 SustainPine v3.0 580
• AutoFact: PREDICTED: similar to copia-like retrotransposable element n=1 Tax=Nasonia vitripennis RepID=UPI00015B472C 4.0e-21
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Putative N-terminus
sp_v3.0_unigene123785 SustainPine v3.0 260
• AutoFact: PREDICTED: similar to copia-like retrotransposable element n=1 Tax=Nasonia vitripennis RepID=UPI00015B472C 3.0e-09
• FL-Next: tr=Putative uncharacterized protein Sb07g023610; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Internal
sp_v3.0_unigene136973 SustainPine v3.0 311
• AutoFact: PREDICTED: similar to copia-like retrotransposable element n=1 Tax=Nasonia vitripennis RepID=UPI00015B472C 0.0001
putative_coding
sp_v3.0_unigene149333 SustainPine v3.0 268
• AutoFact: PREDICTED: similar to copia-like retrotransposable element n=1 Tax=Nasonia vitripennis RepID=UPI00015B472C 4.0e-08
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene160945 SustainPine v3.0 377
• AutoFact: PREDICTED: similar to copia-like retrotransposable element n=1 Tax=Nasonia vitripennis RepID=UPI00015B472C 5.0e-08
• FL-Next: tr=Putative gag-pol polyprotein, identical; Solanum demissum (Wild potato). 0.0
Internal
sp_v3.0_unigene161232 SustainPine v3.0 484
• AutoFact: PREDICTED: similar to copia-like retrotransposable element n=1 Tax=Nasonia vitripennis RepID=UPI00015B472C 5.0e-08
• FL-Next: tr=Putative uncharacterized protein Sb07g023610; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Internal
sp_v3.0_unigene161817 SustainPine v3.0 276
• AutoFact: PREDICTED: similar to copia-like retrotransposable element n=1 Tax=Nasonia vitripennis RepID=UPI00015B472C 3.0e-17
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Internal
sp_v3.0_unigene163608 SustainPine v3.0 317
• AutoFact: PREDICTED: similar to copia-like retrotransposable element n=1 Tax=Nasonia vitripennis RepID=UPI00015B472C 2.0e-06
• FL-Next: tr=Putative polyprotein; Solanum habrochaites (Wild tomato) (Lycopersicon hirsutum). 0.0
Internal
sp_v3.0_unigene166699 SustainPine v3.0 455
• AutoFact: PREDICTED: similar to copia-like retrotransposable element n=1 Tax=Nasonia vitripennis RepID=UPI00015B472C 4.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene175727 SustainPine v3.0 418
• AutoFact: PREDICTED: similar to copia-like retrotransposable element n=1 Tax=Nasonia vitripennis RepID=UPI00015B472C 5.0e-06
coding
sp_v3.0_unigene188330 SustainPine v3.0 318
• AutoFact: PREDICTED: similar to copia-like retrotransposable element n=1 Tax=Nasonia vitripennis RepID=UPI00015B472C 3.0e-05
• FL-Next: tr=Hypothetical retrotransposon; Ipomoea batatas (Sweet potato) (Convolvulus batatas). 0.0
Internal
sp_v3.0_unigene196420 SustainPine v3.0 526
• AutoFact: PREDICTED: similar to copia-like retrotransposable element n=1 Tax=Nasonia vitripennis RepID=UPI00015B472C 2.0e-17
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain