Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: Putative retrotransposon protein, identical n=2 Tax=Solanum demissum RepID=Q6L3S2_SOLDE

Source: Description from AutoFact

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene70799 SustainPine v3.0 363
• AutoFact: Putative retrotransposon protein, identical n=2 Tax=Solanum demissum RepID=Q6L3S2_SOLDE 6.0e-19
• FL-Next: tr=Putative retrotransposon protein, identical; Solanum demissum (Wild potato). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 3.204e-25
Internal
sp_v3.0_unigene70862 SustainPine v3.0 366
• AutoFact: Putative retrotransposon protein, identical n=2 Tax=Solanum demissum RepID=Q6L3S2_SOLDE 5.0e-24
• FL-Next: tr=Putative uncharacterized protein orf215; Nicotiana tabacum (Common tobacco). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 9.628e-21
Internal
sp_v3.0_unigene71485 SustainPine v3.0 339
• AutoFact: Putative retrotransposon protein, identical n=2 Tax=Solanum demissum RepID=Q6L3S2_SOLDE 2.0e-29
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 4.475e-27
Putative N-terminus
sp_v3.0_unigene72880 SustainPine v3.0 354
• AutoFact: Putative retrotransposon protein, identical n=2 Tax=Solanum demissum RepID=Q6L3S2_SOLDE 6.0e-11
• FL-Next: tr=Putative retrotransposon protein, identical; Solanum demissum (Wild potato). 0.0
Internal
sp_v3.0_unigene77476 SustainPine v3.0 215
• AutoFact: Putative retrotransposon protein, identical n=2 Tax=Solanum demissum RepID=Q6L3S2_SOLDE 2.0e-09
• FL-Next: tr=OSIGBa0139I12.6 protein; Oryza sativa (Rice). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 7.649e-29
Internal
sp_v3.0_unigene163374 SustainPine v3.0 416
• AutoFact: Putative retrotransposon protein, identical n=2 Tax=Solanum demissum RepID=Q6L3S2_SOLDE 2.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 0.0
Putative Complete

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain