Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Retrotransposon protein n=1 Tax=Beta vulgaris RepID=A2I5E5_BETVU

Source: Description from AutoFact


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene26875 SustainPine v3.0 277
AutoFact: Retrotransposon protein n=1 Tax=Beta vulgaris RepID=A2I5E5_BETVU 5.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 7.13e-37
Putative Complete
sp_v3.0_unigene40544 SustainPine v3.0 2340
AutoFact: Retrotransposon protein n=1 Tax=Beta vulgaris RepID=A2I5E5_BETVU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 0.0
Putative Complete
sp_v3.0_unigene43759 SustainPine v3.0 1857
AutoFact: Retrotransposon protein n=1 Tax=Beta vulgaris RepID=A2I5E5_BETVU 0.0
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 0.0
Putative Complete
sp_v3.0_unigene55929 SustainPine v3.0 102
AutoFact: Retrotransposon protein n=1 Tax=Beta vulgaris RepID=A2I5E5_BETVU 4.0e-09
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Reverse transcriptase 0.0
Internal
sp_v3.0_unigene56101 SustainPine v3.0 357
AutoFact: Retrotransposon protein n=1 Tax=Beta vulgaris RepID=A2I5E5_BETVU 6.0e-12
FL-Next: tr=Retrotransposon protein; Beta vulgaris (Sugar beet). 0.0
Internal
sp_v3.0_unigene59998 SustainPine v3.0 425
AutoFact: Retrotransposon protein n=1 Tax=Beta vulgaris RepID=A2I5E5_BETVU 6.99949e-42
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 0.0
N-terminus
sp_v3.0_unigene60434 SustainPine v3.0 383
AutoFact: Retrotransposon protein n=1 Tax=Beta vulgaris RepID=A2I5E5_BETVU 0.0
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Reverse transcriptase 1.381e-31
Putative Complete
sp_v3.0_unigene62772 SustainPine v3.0 286
AutoFact: Retrotransposon protein n=1 Tax=Beta vulgaris RepID=A2I5E5_BETVU 1.0e-16
FL-Next: tr=Putative uncharacterized protein; Beta vulgaris (Sugar beet). 0.0
Internal
sp_v3.0_unigene71327 SustainPine v3.0 440
AutoFact: Retrotransposon protein n=1 Tax=Beta vulgaris RepID=A2I5E5_BETVU 2.0e-08
FL-Next: tr=Retrotransposon protein; Beta vulgaris (Sugar beet). 0.0
Internal
sp_v3.0_unigene98528 SustainPine v3.0 466
AutoFact: Retrotransposon protein n=1 Tax=Beta vulgaris RepID=A2I5E5_BETVU 8.0e-21
FL-Next: tr=Retrotransposon protein; Beta vulgaris (Sugar beet). 0.0
Internal
sp_v3.0_unigene134817 SustainPine v3.0 373
AutoFact: Retrotransposon protein n=1 Tax=Beta vulgaris RepID=A2I5E5_BETVU 7.0e-10
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene140006 SustainPine v3.0 344
AutoFact: Retrotransposon protein n=1 Tax=Beta vulgaris RepID=A2I5E5_BETVU 3.0e-14
FL-Next: tr=Retrotransposon protein; Beta vulgaris (Sugar beet). 0.0
Internal
sp_v3.0_unigene148496 SustainPine v3.0 355
AutoFact: Retrotransposon protein n=1 Tax=Beta vulgaris RepID=A2I5E5_BETVU 3.00018e-42
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 0.0
Putative N-terminus
sp_v3.0_unigene148982 SustainPine v3.0 357
AutoFact: Retrotransposon protein n=1 Tax=Beta vulgaris RepID=A2I5E5_BETVU 4.0e-22
FL-Next: tr=Retrotransposon protein; Beta vulgaris (Sugar beet). 0.0
Internal
sp_v3.0_unigene149312 SustainPine v3.0 205
AutoFact: Retrotransposon protein n=1 Tax=Beta vulgaris RepID=A2I5E5_BETVU 2.0e-17
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.959e-09
Internal
sp_v3.0_unigene163444 SustainPine v3.0 275
AutoFact: Retrotransposon protein n=1 Tax=Beta vulgaris RepID=A2I5E5_BETVU 2.0e-29
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Reverse transcriptase 0.0
Putative N-terminus
sp_v3.0_unigene167496 SustainPine v3.0 153
AutoFact: Retrotransposon protein n=1 Tax=Beta vulgaris RepID=A2I5E5_BETVU 1.0e-10
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Internal
sp_v3.0_unigene167770 SustainPine v3.0 326
AutoFact: Retrotransposon protein n=1 Tax=Beta vulgaris RepID=A2I5E5_BETVU 7.0e-14
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene187029 SustainPine v3.0 430
AutoFact: Retrotransposon protein n=1 Tax=Beta vulgaris RepID=A2I5E5_BETVU 6.0e-06
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain