Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH

Source: Description from AutoFact

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene75091 SustainPine v3.0 229
• AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 2.0e-33
• FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Putative Complete
sp_v3.0_unigene76637 SustainPine v3.0 162
• AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 7.0e-19
• FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Putative Complete
sp_v3.0_unigene77098 SustainPine v3.0 160
• AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 8.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene78973 SustainPine v3.0 344
• AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 3.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Polyubiquitin 1.86e-10
Internal
sp_v3.0_unigene124173 SustainPine v3.0 193
• AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 6.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene129248 SustainPine v3.0 678
• AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 0.0
• FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Polyubiquitin 2.009e-10
N-terminus
sp_v3.0_unigene130706 SustainPine v3.0 418
• AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 5.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Misassembled
sp_v3.0_unigene131104 SustainPine v3.0 395
• AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 9.0e-34
• FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Putative N-terminus
sp_v3.0_unigene131268 SustainPine v3.0 222
• AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 4.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene132563 SustainPine v3.0 236
• AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 4.0e-27
• FL-Next: sp=Ubiquitin; Avena sativa (Oat). 0.0
Complete
sp_v3.0_unigene132695 SustainPine v3.0 275
• AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 2.0e-30
• FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Putative N-terminus
sp_v3.0_unigene138484 SustainPine v3.0 290
• AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 2.0e-33
• FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
• Sma3: Polyubiquitin 9.465e-08
N-terminus
sp_v3.0_unigene142285 SustainPine v3.0 940
• AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 5.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Polyubiquitin 1.302e-07
Putative Complete
sp_v3.0_unigene147258 SustainPine v3.0 272
• AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 1.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene147406 SustainPine v3.0 264
• AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 2.0e-29
• FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
• Sma3: Polyubiquitin 1.737e-07
Putative N-terminus
sp_v3.0_unigene147548 SustainPine v3.0 490
• AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 1.0e-39
• FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Misassembled
sp_v3.0_unigene147573 SustainPine v3.0 375
• AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 0.0
• FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Putative Complete
sp_v3.0_unigene147583 SustainPine v3.0 341
• AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 0.0
• FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Putative C-terminus
sp_v3.0_unigene147603 SustainPine v3.0 465
• AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 1.0e-36
• FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Putative Complete
sp_v3.0_unigene147604 SustainPine v3.0 579
• AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 0.0
• FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
• Sma3: Polyubiquitin 2.167e-10
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain