Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH

Source: Description from AutoFact

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene4198 SustainPine v3.0 1005
• AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 0.0
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: Ribulose bisphosphate carboxylase small chain 0.0
Complete
sp_v3.0_unigene4308 SustainPine v3.0 437
• AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 0.0
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: Ribulose bisphosphate carboxylase small chain 0.0
C-terminus
sp_v3.0_unigene4336 SustainPine v3.0 468
• AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 0.0
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: Ribulose bisphosphate carboxylase small chain 0.0
Putative Complete
sp_v3.0_unigene16982 SustainPine v3.0 925
• AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 0.0
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Complete
sp_v3.0_unigene16993 SustainPine v3.0 994
• AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 0.0
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: Ribulose bisphosphate carboxylase small chain 0.0
Complete
sp_v3.0_unigene17020 SustainPine v3.0 1089
• AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 0.0
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: Ribulose bisphosphate carboxylase small chain 0.0
Complete
sp_v3.0_unigene35724 SustainPine v3.0 926
• AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 0.0
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Complete
sp_v3.0_unigene51423 SustainPine v3.0 393
• AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 5.0e-38
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: Ribulose bisphosphate carboxylase small chain 1.562e-25
N-terminus
sp_v3.0_unigene55797 SustainPine v3.0 138
• AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 4.0e-12
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: Ribulose bisphosphate carboxylase small chain 3.84e-13
Internal
sp_v3.0_unigene57424 SustainPine v3.0 193
• AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 9.0e-15
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: Ribulose bisphosphate carboxylase small chain 5.989e-28
Internal
sp_v3.0_unigene61838 SustainPine v3.0 115
• AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 2.0e-05
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Internal
sp_v3.0_unigene65448 SustainPine v3.0 169
• AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 3.0e-19
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: Ribulose bisphosphate carboxylase small chain 9.209e-29
Internal
sp_v3.0_unigene73549 SustainPine v3.0 406
• AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 1.4013e-45
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: Ribulose bisphosphate carboxylase small chain 0.0
N-terminus
sp_v3.0_unigene73694 SustainPine v3.0 446
• AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 3.0e-15
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: Ribulose bisphosphate carboxylase small chain 2.231e-24
C-terminus
sp_v3.0_unigene74811 SustainPine v3.0 240
• AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 3.0e-15
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: Ribulose bisphosphate carboxylase small chain 0.0
Internal
sp_v3.0_unigene77509 SustainPine v3.0 257
• AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 5.0e-27
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: Ribulose bisphosphate carboxylase small chain 7.633e-31
Putative C-terminus
sp_v3.0_unigene127440 SustainPine v3.0 1092
• AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 0.0
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Complete
sp_v3.0_unigene145862 SustainPine v3.0 1472
• AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Putative Complete
sp_v3.0_unigene145916 SustainPine v3.0 492
• AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 0.0
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: Ribulose bisphosphate carboxylase small chain 0.0
Complete
sp_v3.0_unigene146422 SustainPine v3.0 554
• AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 1.0e-35
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribulose bisphosphate carboxylase small chain 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain