Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Gag/pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9C5V1_ARATH

Source: Description from AutoFact


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene113558 SustainPine v3.0 237
AutoFact: Gag/pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9C5V1_ARATH 7.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene120938 SustainPine v3.0 248
AutoFact: Gag/pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9C5V1_ARATH 8.0e-08
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene121057 SustainPine v3.0 429
AutoFact: Gag/pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9C5V1_ARATH 6.99949e-42
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, unclassified 2.659e-26
Putative C-terminus
sp_v3.0_unigene126126 SustainPine v3.0 224
AutoFact: Gag/pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9C5V1_ARATH 1.0e-06
FL-Next: tr=Phytoalexin-deficient 4-2 protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Internal
sp_v3.0_unigene148262 SustainPine v3.0 204
AutoFact: Gag/pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9C5V1_ARATH 4.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene148550 SustainPine v3.0 509
AutoFact: Gag/pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9C5V1_ARATH 7.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative pol protein 2.208e-06
Internal
sp_v3.0_unigene148723 SustainPine v3.0 488
AutoFact: Gag/pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9C5V1_ARATH 9.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 1.403e-08
C-terminus
sp_v3.0_unigene148735 SustainPine v3.0 306
AutoFact: Gag/pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9C5V1_ARATH 3.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene149019 SustainPine v3.0 436
AutoFact: Gag/pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9C5V1_ARATH 1.0e-15
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Putative N-terminus
sp_v3.0_unigene152274 SustainPine v3.0 434
AutoFact: Gag/pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9C5V1_ARATH 7.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene154343 SustainPine v3.0 379
AutoFact: Gag/pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9C5V1_ARATH 2.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene160032 SustainPine v3.0 493
AutoFact: Gag/pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9C5V1_ARATH 7.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Integrase 3.278e-06
Internal
sp_v3.0_unigene160466 SustainPine v3.0 428
AutoFact: Gag/pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9C5V1_ARATH 7.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: F9C16.17 3.411e-06
Internal
sp_v3.0_unigene160542 SustainPine v3.0 363
AutoFact: Gag/pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9C5V1_ARATH 3.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene161428 SustainPine v3.0 351
AutoFact: Gag/pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9C5V1_ARATH 1.0e-10
FL-Next: tr=Gag/pol polyprotein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene161666 SustainPine v3.0 350
AutoFact: Gag/pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9C5V1_ARATH 5.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene166427 SustainPine v3.0 503
AutoFact: Gag/pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9C5V1_ARATH 1.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene183737 SustainPine v3.0 1798
AutoFact: Gag/pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9C5V1_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene187150 SustainPine v3.0 319
AutoFact: Gag/pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9C5V1_ARATH 2.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene202070 SustainPine v3.0 561
AutoFact: Gag/pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9C5V1_ARATH 3.9937e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.981e-13
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain