Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Putative retrotransposon polyprotein n=1 Tax=Ipomoea batatas RepID=Q5MG92_IPOBA

Source: Description from AutoFact

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene44745 SustainPine v3.0 230
• AutoFact: Putative retrotransposon polyprotein n=1 Tax=Ipomoea batatas RepID=Q5MG92_IPOBA 3.0e-20
• FL-Next: tr=Putative uncharacterized protein; Asparagus officinalis (Garden asparagus). 0.0
Internal
sp_v3.0_unigene46439 SustainPine v3.0 493
• AutoFact: Putative retrotransposon polyprotein n=1 Tax=Ipomoea batatas RepID=Q5MG92_IPOBA 1.0e-20
• FL-Next: tr=Putative retrotransposon polyprotein; Ipomoea batatas (Sweet potato) (Convolvulus batatas). 0.0
Internal
sp_v3.0_unigene50421 SustainPine v3.0 133
• AutoFact: Putative retrotransposon polyprotein n=1 Tax=Ipomoea batatas RepID=Q5MG92_IPOBA 7.0e-07
• FL-Next: tr=Putative retrotransposon polyprotein; Ipomoea batatas (Sweet potato) (Convolvulus batatas). 0.0
Internal
sp_v3.0_unigene51990 SustainPine v3.0 182
• AutoFact: Putative retrotransposon polyprotein n=1 Tax=Ipomoea batatas RepID=Q5MG92_IPOBA 7.0e-07
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Internal
sp_v3.0_unigene52882 SustainPine v3.0 370
• AutoFact: Putative retrotransposon polyprotein n=1 Tax=Ipomoea batatas RepID=Q5MG92_IPOBA 1.0e-05
unknown
sp_v3.0_unigene52955 SustainPine v3.0 400
• AutoFact: Putative retrotransposon polyprotein n=1 Tax=Ipomoea batatas RepID=Q5MG92_IPOBA 2.0e-17
• FL-Next: tr=Putative uncharacterized protein; Asparagus officinalis (Garden asparagus). 0.0
Internal
sp_v3.0_unigene55001 SustainPine v3.0 235
• AutoFact: Putative retrotransposon polyprotein n=1 Tax=Ipomoea batatas RepID=Q5MG92_IPOBA 5.0e-11
• FL-Next: tr=Putative uncharacterized protein; Asparagus officinalis (Garden asparagus). 0.0
Internal
sp_v3.0_unigene55502 SustainPine v3.0 360
• AutoFact: Putative retrotransposon polyprotein n=1 Tax=Ipomoea batatas RepID=Q5MG92_IPOBA 0.0001
• FL-Next: tr=Putative uncharacterized protein; Asparagus officinalis (Garden asparagus). 0.0
Putative C-terminus
sp_v3.0_unigene55536 SustainPine v3.0 411
• AutoFact: Putative retrotransposon polyprotein n=1 Tax=Ipomoea batatas RepID=Q5MG92_IPOBA 8.0e-31
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 5.164e-31
N-terminus
sp_v3.0_unigene55913 SustainPine v3.0 343
• AutoFact: Putative retrotransposon polyprotein n=1 Tax=Ipomoea batatas RepID=Q5MG92_IPOBA 2.0e-18
• FL-Next: tr=Putative uncharacterized protein; Asparagus officinalis (Garden asparagus). 0.0
Internal
sp_v3.0_unigene57740 SustainPine v3.0 441
• AutoFact: Putative retrotransposon polyprotein n=1 Tax=Ipomoea batatas RepID=Q5MG92_IPOBA 3.0e-11
• FL-Next: tr=Putative uncharacterized protein; Asparagus officinalis (Garden asparagus). 0.0
Internal
sp_v3.0_unigene58774 SustainPine v3.0 209
• AutoFact: Putative retrotransposon polyprotein n=1 Tax=Ipomoea batatas RepID=Q5MG92_IPOBA 3.0e-11
• FL-Next: tr=Putative retrotransposon polyprotein; Ipomoea batatas (Sweet potato) (Convolvulus batatas). 0.0
Internal
sp_v3.0_unigene58988 SustainPine v3.0 426
• AutoFact: Putative retrotransposon polyprotein n=1 Tax=Ipomoea batatas RepID=Q5MG92_IPOBA 4.0e-27
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Sma3: Putative gag-pol polyprotein, identical 5.171e-08
C-terminus
sp_v3.0_unigene59472 SustainPine v3.0 322
• AutoFact: Putative retrotransposon polyprotein n=1 Tax=Ipomoea batatas RepID=Q5MG92_IPOBA 4.0e-06
• FL-Next: tr=Putative retrotransposon polyprotein; Ipomoea batatas (Sweet potato) (Convolvulus batatas). 0.0
Internal
sp_v3.0_unigene60289 SustainPine v3.0 216
• AutoFact: Putative retrotransposon polyprotein n=1 Tax=Ipomoea batatas RepID=Q5MG92_IPOBA 5.0e-05
• FL-Next: tr=Putative uncharacterized protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Internal
sp_v3.0_unigene61630 SustainPine v3.0 210
• AutoFact: Putative retrotransposon polyprotein n=1 Tax=Ipomoea batatas RepID=Q5MG92_IPOBA 1.0e-13
• FL-Next: tr=Putative uncharacterized protein; Asparagus officinalis (Garden asparagus). 0.0
Internal
sp_v3.0_unigene62732 SustainPine v3.0 298
• AutoFact: Putative retrotransposon polyprotein n=1 Tax=Ipomoea batatas RepID=Q5MG92_IPOBA 2.0e-12
• FL-Next: tr=Putative uncharacterized protein; Asparagus officinalis (Garden asparagus). 0.0
Internal
sp_v3.0_unigene64929 SustainPine v3.0 218
• AutoFact: Putative retrotransposon polyprotein n=1 Tax=Ipomoea batatas RepID=Q5MG92_IPOBA 7.0e-05
• FL-Next: tr=Putative uncharacterized protein; Asparagus officinalis (Garden asparagus). 0.0
Internal
sp_v3.0_unigene67680 SustainPine v3.0 371
• AutoFact: Putative retrotransposon polyprotein n=1 Tax=Ipomoea batatas RepID=Q5MG92_IPOBA 2.0e-11
• FL-Next: tr=Putative uncharacterized protein; Asparagus officinalis (Garden asparagus). 0.0
Internal
sp_v3.0_unigene68156 SustainPine v3.0 348
• AutoFact: Putative retrotransposon polyprotein n=1 Tax=Ipomoea batatas RepID=Q5MG92_IPOBA 9.0e-05
• FL-Next: tr=Putative uncharacterized protein; Asparagus officinalis (Garden asparagus). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain