Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Retrotransposon protein, putative, Ty1-copia subclass n=2 Tax=Oryza sativa Japonica Group RepID=Q2QP15_ORYSJ

Source: Description from AutoFact

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene1293 SustainPine v3.0 990
• AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=2 Tax=Oryza sativa Japonica Group RepID=Q2QP15_ORYSJ 1.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene30271 SustainPine v3.0 955
• AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=2 Tax=Oryza sativa Japonica Group RepID=Q2QP15_ORYSJ 6.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene32031 SustainPine v3.0 489
• AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=2 Tax=Oryza sativa Japonica Group RepID=Q2QP15_ORYSJ 1.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene32056 SustainPine v3.0 637
• AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=2 Tax=Oryza sativa Japonica Group RepID=Q2QP15_ORYSJ 7.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene33540 SustainPine v3.0 824
• AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=2 Tax=Oryza sativa Japonica Group RepID=Q2QP15_ORYSJ 6.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene38360 SustainPine v3.0 793
• AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=2 Tax=Oryza sativa Japonica Group RepID=Q2QP15_ORYSJ 1.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene54539 SustainPine v3.0 495
• AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=2 Tax=Oryza sativa Japonica Group RepID=Q2QP15_ORYSJ 8.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene55435 SustainPine v3.0 424
• AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=2 Tax=Oryza sativa Japonica Group RepID=Q2QP15_ORYSJ 1.0e-06
• FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Internal
sp_v3.0_unigene59488 SustainPine v3.0 417
• AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=2 Tax=Oryza sativa Japonica Group RepID=Q2QP15_ORYSJ 6.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene66098 SustainPine v3.0 481
• AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=2 Tax=Oryza sativa Japonica Group RepID=Q2QP15_ORYSJ 2.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene97980 SustainPine v3.0 433
• AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=2 Tax=Oryza sativa Japonica Group RepID=Q2QP15_ORYSJ 2.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene98894 SustainPine v3.0 657
• AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=2 Tax=Oryza sativa Japonica Group RepID=Q2QP15_ORYSJ 9.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene100159 SustainPine v3.0 727
• AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=2 Tax=Oryza sativa Japonica Group RepID=Q2QP15_ORYSJ 2.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene144972 SustainPine v3.0 904
• AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=2 Tax=Oryza sativa Japonica Group RepID=Q2QP15_ORYSJ 3.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene145430 SustainPine v3.0 630
• AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=2 Tax=Oryza sativa Japonica Group RepID=Q2QP15_ORYSJ 5.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene148162 SustainPine v3.0 278
• AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=2 Tax=Oryza sativa Japonica Group RepID=Q2QP15_ORYSJ 9.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene148523 SustainPine v3.0 431
• AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=2 Tax=Oryza sativa Japonica Group RepID=Q2QP15_ORYSJ 6.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene159472 SustainPine v3.0 443
• AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=2 Tax=Oryza sativa Japonica Group RepID=Q2QP15_ORYSJ 3.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene160649 SustainPine v3.0 390
• AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=2 Tax=Oryza sativa Japonica Group RepID=Q2QP15_ORYSJ 1.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene160845 SustainPine v3.0 461
• AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=2 Tax=Oryza sativa Japonica Group RepID=Q2QP15_ORYSJ 1.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain