Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: tubulin alpha-2 chain [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene2955 SustainPine v3.0 2147
AutoFact: Tubulin alpha-2/alpha-4 chain n=384 Tax=Eukaryota RepID=TBA2_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene37897 SustainPine v3.0 1309
AutoFact: Alpha-tubulin n=3 Tax=Foraminifera RepID=Q26233_RETFI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha-tubulin 7.507e-29
N-terminus
sp_v3.0_unigene96611 SustainPine v3.0 1209
AutoFact: Tubulin alpha-2 chain n=20 Tax=Magnoliophyta RepID=TBA2_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha-tubulin 3.404e-19
C-terminus
sp_v3.0_unigene127854 SustainPine v3.0 1512
AutoFact: Tubulin alpha-2 chain n=20 Tax=Magnoliophyta RepID=TBA2_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene141689 SustainPine v3.0 512
AutoFact: Tubulin alpha-1 chain (Fragment) n=3 Tax=Magnoliophyta RepID=A6MZU0_ORYSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha-tubulin 7.025e-17
C-terminus
sp_v3.0_unigene142280 SustainPine v3.0 1170
AutoFact: tubulin alpha-3/alpha-5 chain [Arabidopsis thaliana] ref|NP_197479.1| tubulin alpha-3/alpha-5 chain [Arabidopsis thaliana] ref|XP_002871906.1| tubulin alpha-3 [Arabidopsis lyrata subsp. lyrata] ref|XP_002873963.1| tubulin alpha-3 [Arabidopsis lyrata subsp 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha-tubulin 2.884e-33
Putative Complete
sp_v3.0_unigene159314 SustainPine v3.0 349
AutoFact: PREDICTED: similar to tubulin, alpha 2 isoform 2 [Strongylocentrotus purpuratus] ref|XP_001177431.1| PREDICTED: similar to tubulin, alpha 2 isoform 2 [Strongylocentrotus purpuratus] 5.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha-tubulin 3.777e-12
C-terminus
sp_v3.0_unigene202860 SustainPine v3.0 544
AutoFact: Alpha-tubulin n=1 Tax=Sterkiella histriomuscorum RepID=Q49I46_OXYTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha-tubulin 2.291e-12
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain