Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene4896 SustainPine v3.0 878
AutoFact: Peptidase S41 family protein [Arabidopsis thaliana] gb|AAL11596.1|AF424602_1 AT4g17740/dl4905c [Arabidopsis thaliana] emb|CAB10554.1| PSII D1 protein processing enzyme [Arabidopsis thaliana] emb|CAB78777.1| PSII D1 protein processing enzyme [Arabidopsis t 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Photosystem II D1 protease 5.889e-13
Putative N-terminus
sp_v3.0_unigene11050 SustainPine v3.0 388
AutoFact: D1 protease precursor [Nicotiana plumbaginifolia] 2.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: D1 protease 2.643e-09
C-terminus
sp_v3.0_unigene141440 SustainPine v3.0 393
AutoFact: D1 protease n=1 Tax=Nicotiana plumbaginifolia RepID=Q8S3I6_NICPL 4.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Photosystem II D1 protease 3.384e-13
Internal
sp_v3.0_unigene148022 SustainPine v3.0 304
AutoFact: D1 protease precursor [Nicotiana plumbaginifolia] 1.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Photosystem II D1 protease 2.662e-13
Putative C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain