Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene26446 SustainPine v3.0 437
AutoFact: Ribosomal protein L18 n=1 Tax=Ostreococcus tauri RepID=Q011F6_OSTTA 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L18 6.591e-31
Complete
sp_v3.0_unigene141446 SustainPine v3.0 304
AutoFact: 60S ribosomal protein L18-3 [Arabidopsis thaliana] sp|Q940B0.1|RL183_ARATH RecName: Full=60S ribosomal protein L18-3 gb|AAL07220.1| putative 60S ribosomal protein [Arabidopsis thaliana] gb|AAM67529.1| putative 60S ribosomal protein [Arabidopsis thaliana] 8.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L18 4.866e-31
C-terminus
sp_v3.0_unigene152961 SustainPine v3.0 467
AutoFact: Ribosomal protein L18 n=4 Tax=Physcomitrella patens subsp. patens RepID=A9RCW9_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L18 6.591e-31
Putative N-terminus
sp_v3.0_unigene153323 SustainPine v3.0 415
AutoFact: Chain R, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome pdb|3IZR|R Chain R, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Tra 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L18 6.591e-31
Complete
sp_v3.0_unigene153824 SustainPine v3.0 385
AutoFact: Ribosomal protein L18 n=4 Tax=Physcomitrella patens subsp. patens RepID=A9RCW9_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L18 6.591e-31
Putative Complete
sp_v3.0_unigene154404 SustainPine v3.0 397
AutoFact: Ribosomal protein L18 n=4 Tax=Physcomitrella patens subsp. patens RepID=A9RCW9_PHYPA 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L18 6.591e-31
C-terminus
sp_v3.0_unigene202785 SustainPine v3.0 700
AutoFact: Ribosomal protein L18 n=1 Tax=Ornithodoros parkeri RepID=A6N9Y7_ORNPR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L18 6.591e-31
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain