Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene8965 SustainPine v3.0 3040
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9R930_RICCO 0.0
• FL-Next: sp=Pentatricopeptide repeat-containing protein At1g18900; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene14497 SustainPine v3.0 488
• AutoFact: Pentatricopeptide-containing protein (Fragment) n=3 Tax=Pseudotsuga RepID=C6F9Z2_PSEMZ 4.99983e-42
• FL-Next: sp=Pentatricopeptide repeat-containing protein At1g74750; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene15105 SustainPine v3.0 315
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9R930_RICCO 9.0e-19
• FL-Next: sp=Pentatricopeptide repeat-containing protein At1g18900; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene43484 SustainPine v3.0 133
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SSF9.1|PP123_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74750 gb|AAD55301.1|AC008263_32 Contains 2 PF|01535 DUF domains [Arabidopsis thaliana] gb|AEE35629.1| 3.0e-08
• FL-Next: sp=Pentatricopeptide repeat-containing protein At1g74750; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene58519 SustainPine v3.0 188
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] ref|NP_973860.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q8GYP6.1|PPR49_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18900 dbj|BAC42129 2.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene59035 SustainPine v3.0 447
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9R930_RICCO 0.0
• FL-Next: sp=Pentatricopeptide repeat-containing protein At1g18900; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain