Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene26067 SustainPine v3.0 364
AutoFact: 60S ribosomal protein L30 [Schizosaccharomyces pombe 972h-] sp|P52808.2|RL30A_SCHPO RecName: Full=60S ribosomal protein L30-1; AltName: Full=L32 gb|AAB17132.1| ribosomal protein Rpl32p [Schizosaccharomyces pombe] emb|CAB11499.1| 60S ribosomal protein L30 1.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L30 9.692e-18
Complete
sp_v3.0_unigene27337 SustainPine v3.0 441
AutoFact: ribosomal protein [Pteris vittata] 3.9937e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L30 1.603e-21
Complete
sp_v3.0_unigene32006 SustainPine v3.0 358
AutoFact: PREDICTED: similar to ribosomal protein L30 isoform 1 n=2 Tax=Ciona intestinalis RepID=UPI00006A67A4 3.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L30 1.354e-21
Complete
sp_v3.0_unigene143242 SustainPine v3.0 415
AutoFact: 60S ribosomal protein L30 n=1 Tax=Wolffia arrhiza RepID=D1MI90_WOLAR 1.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L30 9.692e-18
Complete
sp_v3.0_unigene150986 SustainPine v3.0 240
AutoFact: PREDICTED: similar to ribosomal protein L30 isoform 1 n=2 Tax=Ciona intestinalis RepID=UPI00006A67A4 3.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L30 9.692e-18
C-terminus
sp_v3.0_unigene151997 SustainPine v3.0 256
AutoFact: Ribosomal protein rpl30 n=1 Tax=Lineus viridis RepID=B0Z9N1_9BILA 2.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L30 1.12e-17
C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain